ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2026-09-27 23:15:01, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_008299606 3462 bp RNA linear MAM 04-APR-2023
DEFINITION PREDICTED: Acinonyx jubatus NRDE-2, necessary for RNA interference,
domain containing (NRDE2), transcript variant X3, misc_RNA.
ACCESSION XR_008299606
VERSION XR_008299606.1
DBLINK BioProject: PRJNA923316
KEYWORDS RefSeq.
SOURCE Acinonyx jubatus (cheetah)
ORGANISM Acinonyx jubatus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae;
Felinae; Acinonyx.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_069386) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Updated annotation
Annotation Name :: GCF_027475565.1-RS_2023_04
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.1
Annotation Method :: Best-placed RefSeq; Gnomon;
cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 04/03/2023
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3462
/organism="Acinonyx jubatus"
/mol_type="transcribed RNA"
/isolate="Ajub_Pintada_27869175"
/db_xref="taxon:32536"
/chromosome="B3"
/sex="female"
/tissue_type="blood"
/dev_stage="adult"
/collected_by="Rui Bernardino"
gene 1..3462
/gene="NRDE2"
/note="NRDE-2, necessary for RNA interference, domain
containing; Derived by automated computational analysis
using gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 Protein"
/db_xref="GeneID:106989364"
misc_RNA 1..3462
/gene="NRDE2"
/product="NRDE-2, necessary for RNA interference, domain
containing, transcript variant X3"
/db_xref="GeneID:106989364"
ORIGIN
tcctcgccctgccaggtccccgggtcaagccccagggagtgcgagtgggaaaaaccacacttcccagagtgcaccgcaaccgcgaaggcctcactaccggcgtccgctcgccggcgccatttctggagagggggacggcggtgcggcctgccgtcatggcgctgttcccggcctttgcaggcattggtgagacttccggtagcggcaatgccaggaaagaattagactggctgagcaacccaagcttttgtgctggagccataacctctctgagccaacaaactgaaggggccacagccctggtttctgaagggtcacctctgacaaggagccctctgaaatcagagccttcggatgaaagtgacactaacaaaaagcccaaacaaacaagcagaaaaaagaagaaagagaaaaagaagaaaaggaagcatcaccacaagaaaaccaggagaaaacatgggaggcccagtagcagtgggtctgagccagatagtgattctgaaaaggataaagcttccagaagcattagagacagtaaaaaggaatcagagaaaccaaaccgagaagggaacgccgtcgctgatactgggcaccgctgcgtctggcttgaggacgttcaggctctcacaggggaaaccttcagaacagataagaaaccggatcctgcaaactgggagtataagtctctctaccgaggagatatagcaagatacaagaggaaaggggactcctgccttggcattaaccctaagaagcagtgcatatcctgggagggggctgccacagaaaagaagcactcacacaagcatgtcgagcgctatttcacgaagaagagcgtgggactgatgaacgttgacggagtcgctgttggcggtaaaaccgaacctccctcatctgagccggtctcatttatcccagtgaagggctcggatgatgtggttcctcctgttacgacctggttgaaccctctggggatttacgatcagtccaccacacagtggttacaaggacagggtccttcagagcaagaatcaaagcggccagactcacagacagacagagagcatgccctgctcaaggccaaggtggaggagtttaacaggagagttcgggagaatcccagggatattcagctgtggatggcatttgttgcttttcaggacgaggtcataaagagccctggcctgtatgccatcgaggaaggagagcaggaaaagcggaagcggtctctgaggctcgttctggagaagaagctggccatcctggagcgggccatcgaaagcaaccagagcagcgtggacctgaaactcgccaagctgaagctctgctccgagttctgggagccctccgccctggccaaagagtggcagaaactgatctttctgcatcccaacgatacagccctgtggcagaaataccttttattttgccagagccagtttagcacctttacagtgtcaaaaattcacggtctgtacggcaagtgcttgagcaccttgtctgccgtgaaggacggcagcatcttatcgcaccccgccctgccaggcaccgaggacgccatgtttggtctctttcttcagcagtgccacttcctgcggcaggctggtcactctgagaaggcggtctctctgttccaggccatggtcgacttcaccttcttcaaacccgacagtgtgaaagacctgcccaccaaaggacaggtggaattctttgagcccttctgggacagtggggagccccgggttggcgagaagggcgcccgaggctggagagcgtggatgcaccagcaggagcggggtggctgggtggtcatcagtccagatgatgatgatgatgagccagaagatgaggaccaggaaataagagagaagagtctgcccaggtggcagatctggcttgccaccgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagaccaagaagcaaaccgaggaagactgtgaggatccagagagacaggtgctgtttgatgacattgcccagtctatgatccgtctttccagccaggatcttcagtttcagctggttgcggcctttctgcagttcctgggcgtgccttctggcctcagccctccagcctcttgcctctacctggccatggatgagaacagcatcttcgatgacgggcttcatgacgaaatgccactgacttttctcaacctttcctcttctggtgtcagctgtgttggctgctcagacccactgggccgccggcgctggacccggggtcacaatcgagagggcgaggagttcatccgcaacatctttcaccttgtgatgcctttgttttcaggccgggagaggtctcagctctgcttctcttggttacggtacgagatcgagaaggtcatttggtgtctgcacactaaaaacaagaagaggctaaagtcacagggaaagaactgcaagaaactagccaaaaatctcctgaaggagccagaaaaccgcaacagtttttgcctctggaagcagtacgcacatctggagtggctgcttggcaacaccgaggacgccaggaaggtgttcgatgcggctctcagcatggcggggggcagagacctgagggaccgtgagctgtgtgagcttggcctcctctacgccggcctggaggcggagctgttgccggacccgagaggggccgccacggcacgagccattcacgtactgaccaggctgacggagcaggggccctgcgggccctactccgggcaggcgctggctgttcacatcttgaaagctcggaaggcgtacgaacacgcgctgcaggactgtttgggcgacagctgtgtgtctgctccggctcccagcaactccttcgaccgcctgactagcctggtgaaatgcttcatgctctttcagtacttgaccgtagggatcgacgcggccgtgcgggtgtacgagcaggtgctcgcaaaactgaagggctctgttcccccagggggctctgacccggaggacggtgcccgcgcccagggcccccacggtgcgctggaggccgtgatgctgatgcacacgagcctgctcaggttccacacgaaagtcagcctttaccccctggctcctctgcgacaggctctctccgaggcgttaaggttgtacccaggcaaccaggtgctttggcgggcatacgtgcagattcagagcaggtcccacacagccagtgagaccagaagatttttcgacgcggtcaccaggtctaccaaactcttggagccttggttgtttgcgatcgaggccgagaaaatgaggaagagactggtggaaagtgttcagagatggtagagaggtccacgccacaattcccgagaccggcttgacacatcgcatcagagccctgtttgaaaatgcgttgcggagcgacaacggcagccagtgccccttactgtggaggatgtacctgaattttttggtttccttaggaaac
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]