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Previous release (v1)
2026-09-29 00:40:20, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_041430549 360 bp mRNA linear PLN 15-SEP-2021
DEFINITION Suillus discolor ABC transporter (F5147DRAFT_558639), partial mRNA.
ACCESSION XM_041430549
VERSION XM_041430549.1
DBLINK BioProject: PRJNA727289
BioSample: SAMN12812516
KEYWORDS RefSeq.
SOURCE Suillus discolor
ORGANISM Suillus discolor
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
Agaricomycetes; Agaricomycetidae; Boletales; Suillineae;
Suillaceae; Suillus.
REFERENCE 1 (bases 1 to 360)
AUTHORS Lofgren,L.A., Nguyen,N.H., Vilgalys,R., Ruytinx,J., Liao,H.L.,
Branco,S., Kuo,A., LaButti,K., Lipzen,A., Andreopoulos,W.,
Pangilinan,J., Riley,R., Hundley,H., Na,H., Barry,K.,
Grigoriev,I.V., Stajich,J.E. and Kennedy,P.G.
TITLE Comparative genomics reveals dynamic genome evolution in host
specialist ectomycorrhizal fungi
JOURNAL New Phytol (2020) In press
PUBMED 33355923
REMARK Publication Status: Available-Online prior to print
REFERENCE 2 (bases 1 to 360)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (15-SEP-2021) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 360)
AUTHORS Kuo,A., Lofgren,L.A., Vilgalys,R., Nguyen,N.H., Ruytinx,J.,
Liao,H.-L., Branco,S., LaButti,K., Lipzen,A., Andreopoulos,W.,
Pangilinan,J., Riley,R., Hundley,H., Na,H., Grigoriev,I., Barry,K.,
Stajich,J.E. and Kennedy,P.G.
CONSRTM DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (22-APR-2020) DOE Joint Genome Institute, 2800 Mitchell
Drive, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NW_024541351).
##Metadata-START##
Organism Display Name :: Suillus discolor FC423 v1.0
GOLD Stamp ID :: Gp0305074
##Metadata-END##
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..360
/organism="Suillus discolor"
/mol_type="mRNA"
/strain="FC423"
/db_xref="taxon:1912936"
/chromosome="Unknown"
gene <1..>360
/locus_tag="F5147DRAFT_558639"
/db_xref="GeneID:64692808"
CDS <1..>360
/locus_tag="F5147DRAFT_558639"
/codon_start=1
/product="ABC transporter"
/protein_id="XP_041286207.1"
/db_xref="GeneID:64692808"
/db_xref="InterPro:IPR003439"
/db_xref="JGIDB:Suidis1_558639"
/translation="
IYVALVSSSGCSKSTVIQSLECFYDPISGQISLDGELIDEFNVQAYRQQLSLVSQEPNLYAGTIHFNILLGASIPESEVTQEEIEAACCDANILDFIQSLPDGFNTEVGGKGSQLLGGQK"
misc_feature 7..>360
/locus_tag="F5147DRAFT_558639"
/note="Members of the P-loop NTPase domain superfamily are
characterized by a conserved nucleotide phosphate-binding
motif, also referred to as the Walker A motif
(GxxxxGK[S/T], where x is any residue), and the Walker B
motif (hhhh[D/E], where h is a...; Region: P-loop
containing Nucleoside Triphosphate Hydrolases; cl38936"
/db_xref="CDD:476819"
misc_feature 19..42
/locus_tag="F5147DRAFT_558639"
/note="Walker A/P-loop; other site"
/db_xref="CDD:213216"
misc_feature 154..165
/locus_tag="F5147DRAFT_558639"
/note="Q-loop/lid; other site"
/db_xref="CDD:213216"
ORIGIN
atttatgttgccttagtcagctctagtggttgcagtaaaagtacagtcatccagtcactagagtgtttctacgatccaatttctggacagatttcactcgacggagagcttatcgacgagtttaacgtccaggcatatcgacagcagctttcacttgtgtcgcaagagcctaatttgtacgcgggaactatccacttcaatatcttgctcggtgcctccataccggaatctgaggtcacacaagaagagattgaggccgcttgttgtgatgctaatatactagattttattcaatcacttccagatggatttaatactgaagtcggtggcaagggatcccagcttttggggggtcaaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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