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Previous release (v1)
2026-09-29 00:40:58, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_033826478 528 bp mRNA linear PLN 27-APR-2020
DEFINITION Trematosphaeria pertusa uncharacterized protein (BU26DRAFT_500137),
partial mRNA.
ACCESSION XM_033826478
VERSION XM_033826478.1
DBLINK BioProject: PRJNA625778
BioSample: SAMN05660896
KEYWORDS RefSeq.
SOURCE Trematosphaeria pertusa
ORGANISM Trematosphaeria pertusa
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Dothideomycetes; Pleosporomycetidae; Pleosporales; Massarineae;
Trematosphaeriaceae; Trematosphaeria.
REFERENCE 1 (bases 1 to 528)
AUTHORS Haridas,S., Albert,R., Binder,M., Bloem,J., Labutti,K., Salamov,A.,
Andreopoulos,B., Baker,S., Barry,K., Bills,G., Bluhm,B., Cannon,C.,
Castanera,R., Culley,D., Daum,C., Ezra,D., Gonzalez,J.,
Henrissat,B., Kuo,A., Liang,C., Lipzen,A., Lutzoni,F., Magnuson,J.,
Mondo,S., Nolan,M., Ohm,R., Pangilinan,J., Park,H.-J., Ramirez,L.,
Alfaro,M., Sun,H., Tritt,A., Yoshinaga,Y., Zwiers,L.-H.,
Turgeon,B., Goodwin,S., Spatafora,J., Crous,P. and Grigoriev,I.
TITLE 101 Dothideomycetes genomes: a test case for predicting lifestyles
and emergence of pathogens
JOURNAL Stud. Mycol. (2020) In press
REMARK DOI: 10.1016/j.simyco.2020.01.003
REFERENCE 2 (bases 1 to 528)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2020) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 528)
AUTHORS Haridas,S., Albert,R., Binder,M., Bloem,J., Labutti,K., Salamov,A.,
Andreopoulos,B., Baker,S.E., Barry,K., Bills,G., Bluhm,B.H.,
Cannon,C., Castanera,R., Culley,D.E., Daum,C., Ezra,D.,
Gonzalez,J.B., Henrissat,B., Kuo,A., Liang,C., Lipzen,A.,
Lutzoni,F., Magnuson,J., Mondo,S., Nolan,M., Ohm,R., Pangilinan,J.,
Park,H.-J., Ramirez,L., Alfaro,M., Sun,H., Tritt,A., Yoshinaga,Y.,
Zwiers,L.-H., Turgeon,B.G., Goodwin,S.B., Spatafora,J.W.,
Crous,P.W. and Grigoriev,I.V.
CONSRTM DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (27-JAN-2020) DOE Joint Genome Institute, 2800 Mitchell
Drive, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NW_022987213).
##Metadata-START##
Organism Display Name :: Trematosphaeria pertusa CBS 122368
GOLD Stamp ID :: Gp0036292
##Metadata-END##
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..528
/organism="Trematosphaeria pertusa"
/mol_type="mRNA"
/strain="CBS 122368"
/culture_collection="CBS:122368"
/type_material="culture from epitype of Trematosphaeria
pertusa"
/db_xref="taxon:390896"
/chromosome="Unknown"
gene <1..>528
/locus_tag="BU26DRAFT_500137"
/db_xref="GeneID:54579808"
CDS 1..528
/locus_tag="BU26DRAFT_500137"
/codon_start=1
/product="uncharacterized protein"
/protein_id="XP_033689370.1"
/db_xref="GeneID:54579808"
/db_xref="JGIDB:Trepe1_500137"
/translation="
MTDTADFEQFCLTTLYNAIPMLDNPSDRYEWNNRVCDFIEISSVAEDGAPPPNKDQAKEWYRRQKLYTAMIMKKLSHNAAPRIKALGISDVQSLLEAVRERFNFSRLKDEAIEEEYRSGQRGNEPAKAQRVSNQIQTLTRQILISPDETRCQIHIDKVPFCSFCPTKLAQQPRNI"
ORIGIN
atgaccgacaccgcggactttgagcaattttgcttaactacactctacaatgctattccgatgctcgacaaccccagcgaccggtacgagtggaataatagggtgtgcgattttattgagatttcctctgtcgccgaagatggtgctcctccaccaaacaaagatcaggcaaaggaatggtatcgccgacagaaactctacacagccatgatcatgaagaagctgtcgcacaacgctgcgccgcgaattaaggccttagggatcagtgacgtgcaatctcttcttgaagctgtgcgagagcgcttcaactttagccgcctcaaggacgaggcaatcgaggaagagtaccgatccggccagcggggcaatgagccggcgaaggcgcagcgtgttagcaaccagattcaaactcttacccgccagatattgatatcaccggacgaaaccagatgccagattcacatagacaaggttccgttttgctcattttgtcccaccaaactcgcacagcaacccagaaacatttag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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