LOCUS       XR_013044464            3777 bp    RNA     linear   ROD 29-AUG-2025
DEFINITION  PREDICTED: Peromyscus maniculatus bairdii NRDE-2, necessary for RNA
            interference, domain containing (Nrde2), transcript variant X3,
            misc_RNA.
ACCESSION   XR_013044464
VERSION     XR_013044464.1
DBLINK      BioProject: PRJNA1305401
KEYWORDS    RefSeq.
SOURCE      Peromyscus maniculatus bairdii (prairie deer mouse)
  ORGANISM  Peromyscus maniculatus bairdii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Cricetidae; Neotominae; Peromyscus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_134865) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_049852395.1-RS_2025_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.5
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/27/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3777
                     /organism="Peromyscus maniculatus bairdii"
                     /mol_type="transcribed RNA"
                     /isolate="BWxNUB_F1_BW_parent"
                     /isolation_source="F1 offspring Peromyscus maniculatus
                     biardii x Peromyscus maniculatus nubiterrae"
                     /sub_species="bairdii"
                     /db_xref="taxon:230844"
                     /chromosome="14"
                     /sex="female"
                     /tissue_type="flash frozen blood, liver, brain and muscle"
                     /dev_stage="adult"
                     /collection_date="2022-03-03"
     gene            1..3777
                     /gene="Nrde2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 42 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102911337"
     misc_RNA        1..3777
                     /gene="Nrde2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:102911337"
ORIGIN      

tttcccagagtgcaccgcgagacggagtcctccaaccagagcgctccaggcggcgccatttctgtggtgggagtggtggtgcggcctgcgaacatggcgctgttcccggcctttgcggacataagtgaggcctccgggggtgggacatccaggaaagaattagactggctgagcaacccaagcttttgtgttggaaatctaacgtctctgagccaacaaaccgaagaggtcacagcccttgcttctgaagggtcaccactgacaaggagtcctctgaagtcagagctctcagatgagagtgaccctagcaagacactcacacagataagccgaaaaaagaagaaagagaaaaagaaaaaaaggaaacatcagcaccgcaaaaaagctaagaggagacatgagcaatcgagcagcggtgggtctgagtcggacacagattctgggaaggacagatcttccagaagcctcaaggacactcagaaggagtctgagaaacccagtcaaggaagcaatgctgttgctgttgctgctgctgctgcttctggacaccactccatttggctggaagacattcagactctgacagaagtcttcaggacagataagaaaccagatcctgccaactgggagtataaatctctctaccgaggggatatagcaaggtacaagaggaaaggagactcctgcctgggcattaatcctaagaaacagtgcatatcttgggaaggggcttctgcagctaagaagcagtcacacaagcacctggagcgctattttaccaagaagagtgtgggattaatgcgcactgaggggattgctgtgtgtagtaaccctgagcccccttcctctgagacagtcacatttatccccgtgaaggactccgctgatgtggctacccctgttgcaacatggctgaatcctctggggatttatgatcagtcaactacacagtggttacaaggacagggtccaccagagcaagaatcaaagcagccagattcacagcaggacagggagagtgctgttctcaaggccaaagtggaggagtttaacagaaaggtgcgggagaatcctcgggatactcagctgtggatggcatttgtagctttccaggacgaggtcatgaggggccctggcctgtatgcccttgaggaaggagagcaggagaagcaccggaagtccctgaagctcctgctggagaagaagctggccgtgctggagcgggccatcgagagcaacccgagcagcgtggacctgaagcttgccaagctgcagctgtgcgccgagttctgggagcccagtgcgctggccaaggagtggcagaagctcctcttcctgcaccccaacaacacgggcctgtggcagcgctacctctccttctgccagagtcagttcggcaccttttctgtgtccaaactccacggtctgtacggcaagtgcctgagtaccttgtctgctgtcaaggacggtagcatcttatcccaccctgtgctgccaggcacggaggaggccatgtttgccctcctccttcagcagtgccacttcctacggcaggccggccacgcagagaaggtcatctctttgttccaggccatggttgacttcaccttcttcaagcctgacagtgtgaaggagctgcccaccaaagtacaggtggagttctttgaacccttctgggacagcagtgagccccgtgttggggagaagggagcccgaggctggcgggcatggatgcatcagcaggagcgtggcggctgggtgcttgtcaacccagatgaggatgaggaggagccagaagaggatgaccaggagataaaagataagactctgcccaagtggcagatctggcttgctgttgaacgttctcgagaccagaggcactggcggccctggcgcccagataagaccaagaagcaaacggaggaagactgtgaggaccctgagagacaggtgctgtttgatgatattggacaatctctgatcagactttccagcccggctcttcagttccagctcatcgaggcctttctgcagttcttgggcgtgccttccggcttcctgcctccagcctcctgcctttacctggccatggatgagagcagcgtctttgacagtgaactttatgatgagaagcccttgacttacttcaacccttcgttttcgggcattagctgtgttggctacatggagcagctgggctgtcctcgctggaccaaaggccacagccgagagggcgaggagtttgtccacaacgtcttccaccttgtgctgcctctgttctcaggcaagcacaagtctcagctctgcctctcctggttgcggtatgaggttgccaaggtgatttggtgtctacacactaaaaagaagcgactaaagtctcagggaaagaactgcaaaaaactagccaagaatctccttaaagagccagaaaaccgcaacaacttttgcctctggaagcagtatgcacacctagagtggttgcttggcaacatagaggatgccagaaaggtgtttgatacagcactcagcatggcaggcagcagtgagcggaaggaccgtgaactctgtgaactcagtctgctttatgccgagctggagatggaactgtcgcctgactcgagaggagccaccacaggccgggctgtccatgtgttaacgcgactgaccgagagcagtccctatgggccctacactgggcaggtcgtggccactcaggttctgaaagctcgaaaggcttacgagcacgccctgcaggactgtctgggacagacttgtgcctctgacccagctagcacagagtccttggactgcctgggtagcttggtcagatgctttatgcttttccagtatttgactgtggggatcgacgctgctgtgcagatatatggacaggtgtttgccaagctgaagggctctgttctcccagaaggtcctgggccggaggatagcaccagccctcagagtttgagcagtgttctcgaagcgattaccctgatgcatacaagtctgctgcgattccacatgaacattagtgtgtaccccctggctccactccgagagacgctctcagaggctctcaagctatatccaggcaatcaggttctctggagggcatatgtacagattcagaataagtcccacagtgctaacaagaccagaagattcttcaacatcgtcaccaggtctgccaaacacttggagccttggctctttgcaattgaagccgagaagatgaggaagaggctggtggactctgtccagaggtggtagagaggtccacgccaccatcccggagaccggcctgacgcatcggatcagggccctgtttgaaaatgcaattcggagcgacaagggcagccagtgccccctactgtggaggatgtatttgaattttttggtttccttagggaacaaggagagaagcaaaggtgtgttctacaaggcactccagagctgtccttgggcaaaggtgctgtacatggatgccatggagtacttcccagacgagctacaggagatcctggacttgatgaccgagaaggagcttcgtgtacgcctgcccctggaggagctggacctgctgctggaggactagcgtacaccgggggcagcgctggtctgctgaaccgcgaggacagagggcccaggagagccatggctgtgccagggcttgcttaaccgtctgggtggggtttggactgttttacatattatatatgtgaccaatgatgtacagatggagtcgtgccagtgataaaccttttgtggttgtgtgca

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