ver.2
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Previous release (v1)
2026-06-10 11:04:49, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_012655828 3598 bp RNA linear VRT 08-JUL-2025
DEFINITION PREDICTED: Chelonoidis abingdonii NRDE-2, necessary for RNA
interference, domain containing (NRDE2), transcript variant X3,
misc_RNA.
ACCESSION XR_012655828
VERSION XR_012655828.1
DBLINK BioProject: PRJNA680106
KEYWORDS RefSeq.
SOURCE Chelonoidis abingdonii (Geochelone nigra abigdonii)
ORGANISM Chelonoidis abingdonii
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira;
Testudinoidea; Testudinidae; Chelonoidis.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_133772) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_003597395.2-RS_2025_06
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.4
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 06/10/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3598
/organism="Chelonoidis abingdonii"
/mol_type="transcribed RNA"
/isolate="Lonesome George"
/db_xref="taxon:106734"
/chromosome="4"
/sex="male"
/tissue_type="blood"
/dev_stage="adult"
/geo_loc_name="Ecuador: Galapagos Islands"
gene 1..3598
/gene="NRDE2"
/note="NRDE-2, necessary for RNA interference, domain
containing; Derived by automated computational analysis
using gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 long SRA read, 1 Protein, and
100% coverage of the annotated genomic feature by RNAseq
alignments, including 3 samples with support for all
annotated introns"
/db_xref="GeneID:116827131"
misc_RNA 1..3598
/gene="NRDE2"
/product="NRDE-2, necessary for RNA interference, domain
containing, transcript variant X3"
/db_xref="GeneID:116827131"
ORIGIN
ctacatttcccagcatgctggggcagcgagcggcgccatcttgcctcgttgggcagctgggtctccttgggaagcaagaggggaggaagctgtagttcagcccatggctcttttcccagcctttgccggcgccgctgagcccggggagacgccagccagcggtagcgagggctccaggagagaattggactggcttagcaatccaagcttctgcacagaagatgcattgaaactgcaccagcatgctgcagatcttactcctgagagctcacaacttataagcaggagtccttcaagatcaaaactctcaggcggaagtaataccaatgaagatctaaaaaaatcaactaagaaaaggaaagggaaaaagaaaaagcatcaccaccacaagaaaagaaaaaagaaaactagagaggaatcaagtaacagcgagtcagactcagacaatgagtgcatgaaggataaacctagaggaagtgacacaaaccatgaaagagaagcagcgacattgaatctagaagacataacttcacatggtgtcaccagtcgctttgtttggcttgaggatattcaggctttgacagcagagaccttcagaacagacaagaatccagaccctgcaaactgggaatacaagtcactgtatcgaggggacatagcaagatacaagcggaaaggtgactcatgccttggtattgacctaacgaaacaatgtataacttgggaaagttccatggtagaaaagaaacagtcccacaagcaacctgagcgctacttcacgaagaatagtgtgcagttattgagcacagatggaattccagtttacagtaaaagccaaacttcatctggtccaagcacttttataccggtttcacaactggacagtgatgctcctcctccaacaacctgtgtgaatcctcttgggatttatgatccattgaccacactctggttgcaaggaaaaggtcccccagagcatgagactttaaagcagcaggcatcccaagagaccagtgagaatgttaactctattctaaaggcaaaagtggaagaatataataggatggtcagagaaaatccaagagatgttcacacttggatggaatttgtttcttttcaggatgaagtaatgagaggacccagcccttacgccatcaaagagggagagcaggaaataaggagaaaatcattcaagctaatcctagaaaagaaactggccattttagagagagctattgaaagcaacccaaatgatgttgatctgaaacttgccaagctgaagctttgtacagaattctgggaaccatcaagtttgatcaaagaatggcagaaactggtttttttgcatcccaataatccagtcctgtggcagaaatatctcttattttgtcaaagtcagttcagcaccttttcagtttcaaaagtccacagtttatatggaaaatgtttgagcactttgggagctgtacaggatggcagcatggtatcacatcctgtactgcctggcacagaagaagctatgttagctgtctttcttcagcagtgccattttcttagacaggcgggtcattctgagaaagctgtgtctttgttccaagccctggctgatttcaccttctttaaacctgacagcgtaaaagatctgccaacaagaggacaggtggagttctttgaaccattttgggatagtggagagcctcggtttggagaaaaaggagcaaaaggctggaaaacgtggatgcatcaacaagaaaagggaggctggattatcatcaataaacttgatgaggatgaggaagatgtagatgaagatcaagaaataaaggataaaactctacctaaatggcaaatttggctggacattgaatgttcccgtgaaacaaggcattggctgccttggcgacctgacaaaactaaaaagcagactgaagaagattgtgaagacccagagagacaggtattgtttgatgatcttgggccatctttaatcagactttctagtccagatcttcagtttcagctgctgtactcatttctgcaattcgtgggagtcccatgtgggcgtagtctctttccttcaaatctctatatcgctatggatgagaacaatgtctttgacaatgagcagtctgataggccactgacttcttttgactctctgctttctggagtcaatagtattggccatatggacacaatgaccagagggagacagcacatagggcactgtaaggaaggagaggagttcatacagaatgtctttcatttaatattgccgttgttttcaggaaaggaaaaggcaaacctttctgtctgttggctacaatatgaaatctcaaaggttgttcagtgtctccaagcaaaaaacaagaagaaactgaagtcacagggaaagaaaagcaaaaaactagccaagaatctccttaaggcatctgaaaaccgaaacaacctttccctctggaaactgtatgcctacttggaatggttacttggcaacactgaagatgctagaaaagtgtttgatacagctctttgcttggcaggcactgaaggaatgaaaaatacacaactctgtaatctgagcctgctttatgcttcattggaagtggagctactagagaatttggaggaaactgttatgtcacgtgctttacatatattgaccaaactggctgaaagtgggccatatgtaccttatactgggcaagtgctatctgtgaatatcttgaaagctcggaaggcatatgagcatgcattgcaagattatttaagtgaaagtccaatctctaattgggatcaagctagcaattctagccaactggttaatttagttggttgttatgcacttttccagtatttgactgttgggattgatgctgctgtattaatatgtagacatatttctgaaaagcttaaaggttctgcttcacagaagtttgaaagcattggagaaaatcttggcattcataatttctccactcctcttgaagctgtcacactcatgcacacaaatttacttaggtaccatatgaaagttagcatttaccctttaaatccactgcgagaggcactaacggaagcattgaagctgtatcctagcaaccagtctctttggaggtcatatatccagatccaaagcaagtctcacaatgctagcaaagcacgaagattttttgatagtgtcacaaggtctactaagtccctagagccgtggctgtttgcaatccaagcagaggagatgagaaagaagcttgtcgagaatgttcagagagtagatgttggagaaatatattcaacaattcctgaaactgggttaacaaatcggatcaaaggtttatttgaacatgcaattcagagtgaaaatggtgcccattgtccattgctgtggagaatgtatttgaactttctggttgctaaagtttgagaaccactgctctaaatgttccattccccaacttttgggataaagcttttcagaaaaggaagataaaggggggcttttttattctgaacttaacccgcagttttctctaggaaataaagaaaggagcaaaggactgttttataaagcccttcagaactgtccctgggcaaaggt
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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