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Previous release (v1)
2026-09-27 22:46:39, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_011559245 4075 bp RNA linear VRT 04-JAN-2025
DEFINITION PREDICTED: Erythrolamprus reginae NRDE-2, necessary for RNA
interference, domain containing (NRDE2), transcript variant X2,
misc_RNA.
ACCESSION XR_011559245
VERSION XR_011559245.1
DBLINK BioProject: PRJNA1203666
KEYWORDS RefSeq.
SOURCE Erythrolamprus reginae (royal ground snake)
ORGANISM Erythrolamprus reginae
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata;
Toxicofera; Serpentes; Colubroidea; Dipsadidae; Erythrolamprus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_091950) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_031021105.1-RS_2024_12
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.3
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 12/31/2024
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..4075
/organism="Erythrolamprus reginae"
/mol_type="transcribed RNA"
/isolate="rEryReg1"
/db_xref="taxon:121349"
/chromosome="1"
/sex="female"
/tissue_type="kidney"
/dev_stage="adult"
/geo_loc_name="Colombia: Leticia, Amazonas, Reserva
Natural Tanimboca"
/lat_lon="4.12 S 69.95 W"
/collection_date="2021-01-21"
/collected_by="Valeria Ramirez Castaneda"
gene 1..4075
/gene="NRDE2"
/note="NRDE-2, necessary for RNA interference, domain
containing; Derived by automated computational analysis
using gene prediction method: Gnomon. Supporting evidence
includes similarity to: 10 long SRA reads, 1 Protein"
/db_xref="GeneID:139168166"
misc_RNA 1..4075
/gene="NRDE2"
/product="NRDE-2, necessary for RNA interference, domain
containing, transcript variant X2"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
/db_xref="GeneID:139168166"
ORIGIN
cgccttccttgccctatggctgaaggcggcagcggaagtcatcgttctggaggtttttcgcggcctctacggtgatggctctttttcctgcttttgccgatgttgctaacgccgaggacgtacaagcaagcgaaggctcgagcagagatttgaactggctgacaaatcaaagtttctgcaatgaagatgcactgagattgcaccaaaatgttttagaaattacccactgtgcttctccactccaaagcaatacagccaccagttctgaactccccagagaaaatgaagcctacaaaagtgttcaagcgtcacctaaaaaaagaaagaaaaagaaaaagcaacgagatcacaagaaaaataaaaagaaaagaaagaaagaatggaccactagtggttctgaattagaggatgggagagatgatagaaataatgaaaaaagaggaacagaattgaacttagaagaaaaaaacacaaatgtgccctattcctctacttggcttgatgacgttcagggtttgacaaacgaaggattcagaactgataagaagccagaccctgcaaattggcaatataagtcgttatatcgaggcaacattgcaaggtataagagacgaagcaacttctgccttggccttcaacctaaggagcaacgtattatttgggaaagctcagcagcaaaaaaaacttcattgtataagcgaccagaacgctacttcacaaaaggtggtcggaaactgctgaacgaagaaggcattcatgtcagcggtaaaaatcagaattcctcatctggctcagcctcctggataccaattttgcaactagatccagcagaggctcctccgacatgctcggtaaaccctcttggagtttatgatctgcagaccacactgtggctacaaggaaaagggccctctgctgaagaaggcttaccaaataagcaagaccctcaagaaaactcccagaatgtaagctccccactaatggcaaaggtggaagaatataactgcaaagtcagagagaatcccagggatgtcaaagcatggatggatttggtttcttttcaggatgagctcatgagacatcctagctgttatgccatcagtgagggagaacgggaaatgaggaaagtatcatccaagctaatactagagaagaagctggctattttggaaagagcgatagaaaacaacccaaatgaagtggacctgaaaatagcacggctgaatctttgcatagagttctgggagccatctgctgtgttgaaggaatggcaaaagttgattttcttgcatccaaacaagccagccctgtggcagaaatatctcttattctgccaaagtcagttcagcacctttacggtctccaaaacgcatggctgctatggaaaatgcctgagcacattatcagctgtgaatgatggcagtatgttatcccatcctgcactgccaggcacagaggaagccatgctagccatttttcttcagcagtgccatttccttaggcaggctggccattcagaaaaagctgtgtccctgttccaagcgctgctagactttaccttttttaaaccagataatgtcaaagatctgccaacaagaggacagagggaattctttgaacccttttgggacagcggagagcctcgagttggagaaaaaggagctaaaggttggaaggcctggatgcatcaacaagagaaagggggctgggtgctcatcaacccacccgatgaagatgaggaagatgaagaggatggagaagaaataaaggatagatctctaccaaagtggcaaaactggcttcatgttgaacgttcccgggaagccagacactggttgccctggcgtccagaaaagaacaagaaacagtcattagaagattgtgaagatccagagaggcaggtcttatttgatgaccttggaccatcattgataagactttccagccctgagcttcagtttcaagtactctcctcatttttgcaattcttgggagttccatgcagctgtagacttttgccaccttctttctatatagcgatggatgaaaataactcatttgacactgggtataacaagcaaggaattctgacttctttagatatgcctgtatttggagtcagtaatattggtcatatggactcaatggcccaaggagagaagcatgtgactcactctaaggaaggagaacaatttattcaaaaccttttccatatgatgctgcccttattttcaggcaaagacagatctaacctatgcgttttttggcttcagtatgaagtcactaaggtcactcagtatttgaaaatggaaaagaaaaagaaactaaaattagaaggcaagaaaagcaaaaaattagctaaaaatcttcttaaggcacctgacaacagaaataatgtttcactttggcaactatatgcttacctggagtggctacttggcaatatagaagatgctagaaaagtttttgatacagctttgggaatggctggaattagtggcatccaagacccccaattctgtcatcttagccttctttatgctaaactggaagcagaattactagtcaatctagaaggagctgtagaatcacgtgcaacatacatattgaccaaactggctgaaaagggaccttacgttccctataatggacaagtatcatcagtgaatgttctgaaagctcggaaaacatatgagcacctacttcaagattgtttaactgaaaacctcacttctgatcaagaatgtgctagtgattccagccatctgattggtttggttggttgttatagccttttccaatatttaactcttgggattgactctgcaatgtcaatatatcatcaggtttctcaaaagctgaaagacaaggatcctggagaaaggcttagtggtcaacatttcactactacgcctcttgaagccctctccctcatgcatgtaagcttgctccggttccacatgaaaatcagtgtgtatcctttgagtcttctccgtgaagtactgttggaggttttaaagaggtatcccagcaaccagtctttttggagttcatacatccagatccaaagcaagtctcacaatgctagcaaagcccggcgtttttttgatgctgttacaagaacgacacaattggtggagccttggctgtttgcaatccagctggagcaaatgaggaaaaaactaattgaaagggtccagaggtaatgtcatctccataacgatggtcagggagccgactggagatgtgtatgccaccattcctgaaattgggttaacaaatcgaatcaaagctttatttgaacatgcaactcagactgaaaacggtgcccattgtccattgctctggaggttgtatatatgcttcgtggtttctttgggagataaggcaaaaagtaaaggcatattttacagagcgcttcaaaactgtccctggacaaaagtgttatatatggatgctatagaatactttccagatgagctgcaagagaccctcgatctaatggctgagaaagaactgcgagtacgggtaccaatagaagaattggagctgctacttgaagactgaagaaagatacaaagacaaatgatcagcctgttgatataatgaaccttcaatatagctagggagaaaatgtttatgattaatttagcatctgtaaaaatatatagaataagagtttatttttttatccaaacatgtattccattaagtgcaggtatgggtaagactctttagtaacactcgcaactgtctcattgttaaaaatactagtccaattatataagccaaatacatttaggataaagtccagttgaatgggaagttgtttgcttccagttgattctgattttatggatgactttttattccagattgaaattccttggaattgtacaggttgtttaaacttgtggaaatatgcagcaatttgagagtttagtagaaacctttaattaatgaaggaacctgtaactgaaggtttatcagtttattgtgacaaaggaccggtgaaatgtaaatatctttgtaaatatatataaaagttctattggaatgtggaatcttttaaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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