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Previous release (v1)
2026-06-10 14:24:23, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_011415201 357 bp RNA linear PLN 05-DEC-2024
DEFINITION PREDICTED: Nicotiana tomentosiformis uncharacterized lncRNA
(LOC138908792), ncRNA.
ACCESSION XR_011415201
VERSION XR_011415201.1
DBLINK BioProject: PRJNA257218
KEYWORDS RefSeq.
SOURCE Nicotiana tomentosiformis
ORGANISM Nicotiana tomentosiformis
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; asterids; lamiids; Solanales; Solanaceae;
Nicotianoideae; Nicotianeae; Nicotiana.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_090814) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_000390325.3-RS_2024_10
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.3
Annotation Method :: Best-placed RefSeq; Gnomon;
cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 10/03/2024
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..357
/organism="Nicotiana tomentosiformis"
/mol_type="transcribed RNA"
/bio_material="USDA:TW 142"
/db_xref="taxon:4098"
/chromosome="3"
/tissue_type="leaf"
gene 1..357
/gene="LOC138908792"
/note="uncharacterized LOC138908792; Derived by automated
computational analysis using gene prediction method:
Gnomon."
/db_xref="GeneID:138908792"
ncRNA 1..357
/ncRNA_class="lncRNA"
/gene="LOC138908792"
/product="uncharacterized lncRNA"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
/db_xref="GeneID:138908792"
ORIGIN
gccttcacatgcattaaaaagagaaaatttaaagttcgaaacctttgaagatctagaaagcaaagttctaaaaaagaaacaaaagaaaaaaggggaaatgttatttcaaggaaaaaatttgaaatcaacttgatggcttgcgagttttgagtaccaatctcttcttgggtttctaaaaattgcggaatttgaaaatctattgttgttgtattcatgtattagcttagctccactctctcttcttcttagccttatttagcctcacagctttgtttttaaaatactaggtatgtacacttccagttctttgattgttgctagttcgaatgaatgaaatattgatttgttttggctcca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]