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Previous release (v1)
2026-09-27 23:14:30, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_009644992 3365 bp RNA linear VRT 07-NOV-2023
DEFINITION PREDICTED: Hemiscyllium ocellatum NRDE-2, necessary for RNA
interference, domain containing (nrde2), transcript variant X2,
misc_RNA.
ACCESSION XR_009644992
VERSION XR_009644992.1
DBLINK BioProject: PRJNA1034606
KEYWORDS RefSeq.
SOURCE Hemiscyllium ocellatum (epaulette shark)
ORGANISM Hemiscyllium ocellatum
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes;
Hemiscylliidae; Hemiscyllium.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_083408) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_020745735.1-RS_2023_11
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.2
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 11/02/2023
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3365
/organism="Hemiscyllium ocellatum"
/mol_type="transcribed RNA"
/isolate="sHemOce1"
/specimen_voucher="Juvenile #1654"
/db_xref="taxon:170820"
/chromosome="8"
/sex="male"
/tissue_type="spleen"
/dev_stage="juvenile"
/geo_loc_name="Australia: Clayton, Melbourne, Victoria"
/lat_lon="37.9105 S 145.1293 E"
/collection_date="2019-01-02"
/collected_by="Frank Tulenko"
gene 1..3365
/gene="nrde2"
/note="NRDE-2, necessary for RNA interference, domain
containing; Derived by automated computational analysis
using gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins"
/db_xref="GeneID:132818425"
misc_RNA 1..3365
/gene="nrde2"
/product="NRDE-2, necessary for RNA interference, domain
containing, transcript variant X2"
/db_xref="GeneID:132818425"
ORIGIN
cggcctgtggagaatggagccgctgtcgggctccttgttcccggcgttcggtgtgagggaatcccgctgtgggagtgcctctgacggattggattggctcagtaatcaaagcttccgcactgaagatgccctgcaactgcaccatcgtatcgtgggcgatgcagcagacacaacccaggggtcaccccaggcaagtgatcattcagggataactgggggagttttggatcaaggcgaacaagatgcaccggccaaaaagaagaagaaaaggaagaaacatcggcagcacagaaaggataagaggaaggacagagcgattcacaccggcagcgaatctgatcctgaactcttccgagataaagactctgagactcctgcagagaggtctgacgccagtgctggtcttccccagggtcaattcatgtggctggatgacctccatctgcaaactgcacagaccttctgtatagacagaaaagctgatcctgccaactgggagtacaagtcactctatcggggagatttggcaaggtacaagaggtgtggggatgtctgccttggccttgactccagaaagcagcacattatctgggaagattcaccccgaccaaagaaaaaggccaggaagagggatgatcgatactacagctcatcgggccttcagttcctgagcactggctctgttcctgttcgctgtagagggtgtgtgcaaggaagcattcctgtgcctggtacagactccttcataccagttccagactgggcagagattgaaagtgaatccttaggcactgtcacctggttcaatccacttggaatttacgatgaatccaccgctttgtggctccagggaaaaggccgagaggagccggagaagcaatcctgcctgccctctgatagcagtgagaagataaactcggtaaacatggccaaagtggagacgttcaataggatgttgagagaagaccctgggaatgtccaaatgtggatggagtttgttcattttcaggatgaattaatgcaggacccaagtccgtacatgacctctgcagctgagtctgagaaacggaagagatcccgaagggctgtctgggagaaaaagctggccattttggaacgagccattgaaagcaatcccaacaatgtggagctgaaagtagcccggctggagctcggcaaagaatcttgggaaccatccaatctggtcaacgaatggaaaaaggtggtctttctgcacccaaacaacaccactctgtggcagaggtacctgctgttctgccagagccagttcagcaccttttcgacatccaaggtcaatggcatctatggcaagtgcctgagcaccctggcagctgctctggatggtaccctactgtcccatcctgcactgcctgacacagaggaagccatgtttgcaattttcctgcagcagtgtcacttcttgcgacagactggccactcggaaaaagccattgccctcttccaggctctcattgacttcaccttcttcaaacctgacagtgttgctggcctgataaccaaggcacaggtggagttctttgaaccgttctgggacagtgatgagccccggtttggagaaggaggggcaagaggttggagagtttggatgcgacagcaagaaaggggcggctgggttgtcctgaatgagaaaggcgacaatgaggatgaggaggaagatggggaggaggtcaaagacaagacactacccaagtggcagctttggctgcatgtggagagcagccgtgactccaagcactgtctgccatggcgagctgataaggcgaagggtcagactgaagaagactgtgaggatcctgacagacaggtgctgtttgatgacattggttcttcaatgttcaaagtatccagcccagaactgaggttccagctcatgtcatcgtttttccagttgctgggaattccaacaggattcagcctgcctccgtgctgcctgaatatggtgctggatgatcctagcttgtttgactgtggctcagctgatgagagacctctatcttgctgtcccactccagctgctggggtcagcaccatcggcttcatgccagcaatgcctaatgccaggcagccagtcagccactgcccagaaggggaggacttcatacaaaccgcgtttcaccaggcgttgcccctgttcgctgggaaagagcggtcagagctcgccctgtactggctgcagtatgaaaaatcaaaggtggtgaggagcctgcagctcaggagaaagaagcagccgaaatctctggggaagaggagcaagaaactcgctaaaaaccttctgaaggagggtgaaaaccggaacaatctgtccctgtggagggaatacgcccatttggaatggctgctggggaatgtggaggactcgagaagggtttttgacacggccattgctttgtctgtctctcagggcctgcagagctccaccctgtgtgacctctgcttcctgtactcctcactggagctggagtcagtgcagagcatcagtgcgtcaacaacaatgcgggcggtttatatcctcactagccttgccctgggtatcacctactcaccttacgcaggtgaggtgctgccagttaatgtgctgaaggctcgaaaaacatacgagcgatctttccaggacccgcctaacgacgacacagctttaaccggcagccagaggcctggccagctcatcagcctggtaggctgcttcgccctcttccagtacctcacgctgggcattcaggctgccgactcactgtacaggcaggcagctgaaaggcttgtaggcctctcctcgctggaaaaggcccaggccaagccgagcgtgtggcgacagagtgtgatgtgtgcgttggagaggctgactgtgatgcacgtgaggttgctgaggttccacatgcaggccagtgtgtatcccctgggccctgtccgccacacgctcacacacgctctgggccagtatcctggcagccaccagctctggaagctctacacgcaggttgaaagccgctctcacgatgccagccgagcccgaaggttcttcgacgccaccgcccggtcagcgccagacctcatcgtgccgcggctgtttgccatctacgcagaagagcggagaaaggagcgtgtcgacgctgtgcagagatcttgggattttgtacagcactctcccagaaaccggcctcaccaaccggatcagagcgctgtttgagcacgctgttcagacagaggctggcgcacactcggttttactttggaggatgtacctgaacttcacggtgactcaaggaaacattgagaagacaaagggtgtattttacagagcactgcaggcgtgcccgtgggcaaag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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