LOCUS       XM_069510839            1621 bp    mRNA    linear   VRT 28-OCT-2024
DEFINITION  PREDICTED: Paralichthys olivaceus DNA ligase 1-like (LOC109646891),
            mRNA.
ACCESSION   XM_069510839
VERSION     XM_069510839.1
DBLINK      BioProject: PRJNA1170318
KEYWORDS    RefSeq.
SOURCE      Paralichthys olivaceus (Japanese flounder)
  ORGANISM  Paralichthys olivaceus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei;
            Paralichthyidae; Paralichthys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091108) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_024713975.1-RS_2024_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/17/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Paralichthys olivaceus"
                     /mol_type="mRNA"
                     /isolate="ysfri-2021"
                     /db_xref="taxon:8255"
                     /chromosome="16"
                     /sex="female"
                     /tissue_type="muscle"
     gene            1..1621
                     /gene="LOC109646891"
                     /note="DNA ligase 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read"
                     /db_xref="GeneID:109646891"
     CDS             150..1526
                     /gene="LOC109646891"
                     /codon_start=1
                     /product="DNA ligase 1-like"
                     /protein_id="XP_069366940.1"
                     /db_xref="GeneID:109646891"
                     /translation="

MPKNKSKRVPDSEKLFEDLLEAKQKLDSENLNLAHENASLRMAMSCKEATWRKEKESMQNADFERLKEELELDLKDAKKELRIQEKEYRSLSTRNQSQQAEIHKIRRDLKQKCNQVNELEYSIKQREQVIDRTLHEKQALDKQIDELTTKLKAMGTKVLQNEPDWRSEIKALKDELSREQAEKKDGLMKIQALKDELSREQAEKNSGFIKIKALKDELSREQAEKKDGFFKIKALKDELSREQAEKKDGFFKIKALKDELSREQAEKKDGFFKIKALKDELSREQAEKKSGSNKIKELERMLKVTEEKWVTKHEAKILHMDQMIASLTSQNIALEARNQKLISMQQATEIRVLQNKNEWETKVHALEDHLSCEQVEKEAGLVKIKELERLVSDTEQMWAAKYEADIKMLILKQIKLQELALMSDKDKATKVKEQKKAKKEAEKRRKKELKEKKKQEKR"

     misc_feature    <303..>1049
                     /gene="LOC109646891"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; Region:
                     Smc; COG1196"
                     /db_xref="CDD:440809"
     polyA_site      1621
                     /gene="LOC109646891"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ggttcagtgcctataagagttcaggagaagaccttgtgaggacaacagctccaaaactagaccacagatccacaaatctttgatacacgagaccgtcagaagacagaatatacttcagtaaacctacactattcctgtatttagccaacatgccgaagaacaagtcaaaaagggtgccagactccgagaaattgtttgaggacctccttgaagcaaaacagaagttggactctgagaatttgaatctggctcatgaaaatgccagtttaaggatggccatgtcctgcaaagaagctacatggcggaaggaaaaggagagcatgcagaatgcagactttgaaagactcaaggaggaactagagctcgatctaaaggatgccaagaaggagttgaggatccaagagaaggagtacaggtctttgagtactcgtaatcaaagccagcaggcagagatccacaagatcagacgtgacctgaaacaaaagtgcaaccaggtgaatgagctggagtactcgataaaacagagggaacaggtgatcgacaggactctgcatgagaaacaggcgctggacaaacaaattgatgagctcacaaccaagcttaaagctatggggacaaaagttctccagaatgagcctgactggcgctcagaaatcaaggctctgaaggacgagctcagccgtgagcaggcagagaagaaagatgggttaatgaaaatccaggctctgaaggacgagctcagccgtgagcaggcggagaagaactctggcttcattaaaatcaaggctctgaaggacgagctaagccgtgagcaggcggagaagaaggatgggttcttcaaaatcaaggctctgaaggacgagctaagccgtgagcaggcggagaagaaggatgggttcttcaaaatcaaggctctgaaggacgagctcagccgtgagcaggcggagaagaaggatgggttcttcaaaatcaaggctctgaaggacgagctcagccgtgagcaggcggagaagaagtctggctccaataaaatcaaggagctggagagaatgctcaaggtcacagaagagaagtgggtgaccaagcatgaggctaaaattctccatatggatcagatgatcgccagtctcaccagtcagaatatagcactggaagccagaaaccagaaactaatctccatgcagcaagccaccgagataagggtcctccagaacaagaatgagtgggagacaaaagttcacgctctggaggaccatctcagttgtgagcaggtggagaaagaggctggattagtaaaaatcaaggagctggagagactggtcagcgacactgagcagatgtgggcggccaagtacgaggccgacataaagatgctcatcctgaaacagatcaagcttcaggaactggccttgatgagcgacaaggacaaggcaacgaaagtaaaggagcaaaagaaagcaaaaaaagaggcagagaagaggcgaaagaaggagctgaaagagaagaagaagcaagagaagagatagaaactagacagagagaaggaggagaagaggcaaaggaaattaaaaagaaaatatgtacctctcttaaaaaaaaaataaagttgaaatttaatcaa

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