LOCUS       XM_062316808            1432 bp    mRNA    linear   PLN 17-JAN-2024
DEFINITION  PREDICTED: Alnus glutinosa protein argonaute 5-like (LOC133878273),
            mRNA.
ACCESSION   XM_062316808
VERSION     XM_062316808.1
DBLINK      BioProject: PRJNA1062842
KEYWORDS    RefSeq.
SOURCE      Alnus glutinosa
  ORGANISM  Alnus glutinosa
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Fagales; Betulaceae; Alnus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_084894) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_958979055.1-RS_2024_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/10/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Alnus glutinosa"
                     /mol_type="mRNA"
                     /db_xref="taxon:3517"
                     /chromosome="9"
                     /note="contig: scaffold_74_ctg1"
     gene            1..1432
                     /gene="LOC133878273"
                     /note="protein argonaute 5-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:133878273"
     CDS             268..1233
                     /gene="LOC133878273"
                     /codon_start=1
                     /product="protein argonaute 5-like"
                     /protein_id="XP_062172792.1"
                     /db_xref="GeneID:133878273"
                     /translation="

MSSRRGGGRQPDSRLDQPSPAAYQGGGGRGREGGGGSGRGASSTFPPAPAPEASFPANPPPSASPAGPPSATLASSDSSAASSSARPPVSSEASSSSRPLVPDSTCINMFDGRYNVMGRSFIHPELGQTGELGNGLEYWRGFYQSLRPTQMGLSLNIDVSARAFYEPILVTDFVAKHFNFNVSMPLSDQDRLKIQKALRRVKVEVTNREYSRSYKVTAVTTQPTSQLTFTLDDQGTRISVAQYYREKYNIALKNVNLPALQAGSDTKPIYLPMELCKISPGQRYYKRLNERQVTNLLRATSQRPQDRQNSINQECIQPDDT"

     misc_feature    619..765
                     /gene="LOC133878273"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:462567"
     misc_feature    775..1101
                     /gene="LOC133878273"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(907..909,952..954,985..987,997..999,1051..1053,
                     1072..1074,1078..1080)
                     /gene="LOC133878273"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     polyA_site      1432
                     /gene="LOC133878273"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ggaaggagaagggggtaaaaatgtcagaggcaagcagccgtcccacccattggctccaacccatatttccacgtctgttcctctcaccagattttttgtcctatatatatacgagctctcaccctggtcgacgctcacacacactctctcagtcgtcgtttcctctcgccacatcttttgtcctttaaattcatgctctgattgactgaccttcttctacgctctacactttcgatctttttgtcgctctttttttctaaagccacaatgtcgtcgcgtcgaggcggtggtaggcaacctgactctcgcctagaccagccgtccccggctgcttatcaaggcggaggcggtaggggtcgcgaaggcggaggaggaagtggtcgcggtgcttcttcaaccttccctccggctcctgccccggaagcttcctttccggcgaatcctcctccgtccgcttctccggctggacctccttcagcaactctagcgtcatcggattcttctgcggcatcgagctcggctaggccgccggtttcttctgaggcgtcgagttcgtctcggccactggttccagattcgacatgtattaacatgtttgacggtaggtacaacgttatggggagatcatttatccatcctgagttgggccaaacgggtgagctgggcaatggtttagagtattggagagggttttatcagagtcttcgtccaacccaaatgggactttcccttaatattgatgtgtcagctcgggcgttctatgaaccgattcttgtgacagattttgttgcaaaacattttaatttcaatgtttcaatgcctctgtctgatcaagatcgtctgaagattcaaaaagcactgagaagagtcaaagtagaggttactaatagggagtattccagaagttacaaagtcactgcggtaacaacacaaccaacgagccagttaacgtttactcttgatgaccagggaacgagaatatcagttgctcaatattatcgtgagaaatataatattgcgcttaagaatgtgaatctgccagcccttcaagctgggagtgatacaaaacctatttatttgcctatggagctttgtaagatttctcctggacagagatactataagagattaaatgaaagacaagtgactaatcttttaagagcaactagccaacggcctcaagataggcaaaatagcatcaaccaggaatgtatacaacctgatgacacttaaatgggcaatggcaaagttattccagaatcctgcaaccatgacaaaagttcaacaagaaaacaagaaagaagaatttgatattgcttgaggctccaaatgaatttgatattgtccaagttggaatttgtggttgtatttcatatagataaatactttacacttggtgttgtatgttgttgggtcttgtaattgtttgtaa

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