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Previous release (v1)
2026-09-27 22:32:41, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_056628754 3114 bp mRNA linear PLN 06-JUN-2023
DEFINITION Penicillium cosmopolitanum uncharacterized protein (N7509_004117),
partial mRNA.
ACCESSION XM_056628754
VERSION XM_056628754.1
DBLINK BioProject: PRJNA973687
BioSample: SAMN30185324
KEYWORDS RefSeq.
SOURCE Penicillium cosmopolitanum
ORGANISM Penicillium cosmopolitanum
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae;
Penicillium.
REFERENCE 1 (bases 1 to 3114)
AUTHORS Petersen,C., Sorensen,T., Nielsen,M.R., Sondergaard,T.E.,
Sorensen,J.L., Fitzpatrick,D.A., Frisvad,J.C. and Nielsen,K.L.
TITLE Comparative genomic study of the Penicillium genus elucidates a
diverse pangenome and 15 lateral gene transfer events
JOURNAL IMA Fungus 14 (1), 3 (2023)
PUBMED 36726175
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 3114)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3114)
AUTHORS Petersen,C.
TITLE Direct Submission
JOURNAL Submitted (14-DEC-2022) Department of Chemistry and Bioscience,
Aalborg University, Fredrik Bajers Vej 7H, Aalborg, Nordjylland
9220, Denmark
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NW_026622675).
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..3114
/organism="Penicillium cosmopolitanum"
/mol_type="mRNA"
/strain="IBT 29677"
/culture_collection="IBT:29677"
/db_xref="taxon:1131564"
/chromosome="Unknown"
gene <1..>3114
/locus_tag="N7509_004117"
/db_xref="GeneID:81367734"
CDS 1..3114
/locus_tag="N7509_004117"
/note="Argonaute linker 1 domain; Argonaute linker 2
domain; N-terminal domain of argonaute; PAZ domain; Piwi
domain"
/codon_start=1
/product="uncharacterized protein"
/protein_id="XP_056491488.1"
/db_xref="GeneID:81367734"
/translation="
MSDNRGRGRGRGDRGDRGGGDRGGRGRGRGDGNGSGRGDTSMPFRPARGRGGDDNYRGRGGGNRGGSDRGGRGRGGDDGYRGRGGGRGRGDDGYRGRGGDRGGRGGRGGFQSGPQGPSIYRAGQSVPAPDANVLKTENALAKSLVGFKQADQAYPLRPGYGTLGKEVTLYANYLSLTGLAKGKLLHRYNVEIVAEKVRDAPAGKKARQIIACLVDEHFAAQKSHVATDYRSTIISAVDLNLTEGQTFNIRYKAEGEDEYPEDPRVYQVKCGDMLATKPELIAALNIIMGHHPKTSTDVVSVGANKHFGVSSQLIDRQDLSGGLEVLRGFFISVRAATARVLLNVQVKYVACYKAGSLAQTIQDFRNGAEYRYAYDGKKSYLLAKFLTRMRITPNHIKRKTSSGKPRPAPPKTISGLAKREDGRSSPNPPKVARDGAGPNDVQFFLRAPGQAAPKAAGAGKKGKKGPAPAGPAQAGKYVSVAQYFLDSYGMNINNEFPVINVGSRAEPSYLPVEACDVPVGQPVANKLSPDQTKNMLNFAVRGRSPAQNAEAIATNGVSMLGVNPPNGTLASFGVGVNPDLITVKGRVLPAPTVYYKNNKSFTPVRGSWNMQDIKFCKSGALKNWTFIFFPGRQYDRMSNTDVNDLLSTFADHLRKAGIAVEAPKQGARILQPQPGNIQKEIKGLLDKHGKLDLILGIMSNTDTAIYNSIKQTCDVTYGVKNVNVQASKLTSDRGLDQYCANVGLKINLKLGGANQSLKNMGLFGDGKTIVAGIVASVDKDLAQWPADIVVQKRRDEMVSDLDRLLQSRIRLWASHNEGAFPENIVVYRDGVSEGQYNLVIDKELPLLKQACKTVYSAKDTANGLPKMAIIIVGKRHNTRFYPTNPGDAERSNNPQPGTVVDRGISEGRSWDWYQQAHSCLQGTARPAHYFTVWDEIFHPKYPSDANGPGAADVLQELTHKMCYLFGRATKAVSVCPPAYYADLVCTRARCYLHHVFDPSTPSASVAGTERSGNNDPTLSDSKTYRPHELVKDTMFYI"
misc_feature 904..1059
/locus_tag="N7509_004117"
/note="Argonaute linker 1 domain; Region: ArgoL1;
pfam08699"
/db_xref="CDD:462567"
misc_feature 1069..1551
/locus_tag="N7509_004117"
/note="PAZ domain, argonaute_like subfamily. Argonaute is
part of the RNA-induced silencing complex (RISC), and is
an endonuclease that plays a key role in the RNA
interference pathway. The PAZ domain has been named after
the proteins Piwi,Argonaut, and Zwille; Region:
PAZ_argonaute_like; cd02846"
/db_xref="CDD:239212"
misc_feature order(1231..1233,1327..1329,1438..1440,1450..1452,
1501..1503,1522..1524,1528..1530)
/locus_tag="N7509_004117"
/note="nucleic acid-binding interface [nucleotide
binding]; other site"
/db_xref="CDD:239212"
misc_feature <1423..1608
/locus_tag="N7509_004117"
/note="PAZ domain; Region: PAZ; pfam02170"
/db_xref="CDD:460472"
misc_feature 1702..2976
/locus_tag="N7509_004117"
/note="PIWI domain, Argonaute-like subfamily. Argonaute is
the central component of the RNA-induced silencing complex
(RISC) and related complexes. The PIWI domain is the
C-terminal portion of Argonaute and consists of two
subdomains, one of which provides the...; Region:
Piwi_ago-like; cd04657"
/db_xref="CDD:240015"
misc_feature order(2116..2118,2128..2130,2164..2175,2182..2184,
2212..2214,2221..2223,2233..2235,2245..2247)
/locus_tag="N7509_004117"
/note="5' RNA guide strand anchoring site [active]"
/db_xref="CDD:240015"
ORIGIN
atgtccgataatcgtggtcgaggccgaggccgtggagaccgtggagaccgaggaggaggagatcgtgggggtcgcggacgcggccgtggtgacggcaacggcagtggccgtggtgataccagcatgccattccgcccagcaagaggtcgtggaggggatgataactatcgaggtcgtggaggaggcaatcgaggcggaagtgatcgaggaggccgcggtcgtggaggggacgacggctaccgaggtcgtggaggaggccgtggtcgcggagacgacggctatcgcggccgcggaggcgatcgtggaggtcgaggtggtcgtggtggatttcaatctggaccacagggtcccagcatctatcgtgcaggtcaatccgtccccgcccccgatgccaacgttctcaagaccgagaacgccctcgcaaaatccctcgtgggcttcaagcaagccgatcaggcatatcccttgcgcccgggatatggaaccctaggcaaagaggtgactttgtacgccaactacctgtcgctcacaggtcttgccaaggggaagcttctgcaccgatataatgtcgagatcgtggccgagaaagttcgggacgctccagctggaaagaaagctcgccagattatcgcctgcctcgttgacgaacacttcgccgcccagaaatcccacgtcgcaactgattatcgctccacaatcatctcggctgtcgacctcaatcttactgagggccagaccttcaacatcagatacaaggccgaaggcgaagacgaataccccgaggaccctcgcgtgtaccaagtcaaatgcggggacatgctagccaccaagccagagctcatcgccgctctaaacatcattatgggccaccaccccaagaccagcaccgacgtagtctccgtcggagctaacaagcatttcggagtctccagtcagctcatagatcgtcaggatctctccggtggtctcgaggttcttcgcggatttttcatcagtgtccgcgcggctaccgcacgggtgttgctgaacgtccaggtcaagtatgtggcctgctacaaggcaggctctttagcccagaccatccaggacttccggaatggtgcagagtacagatatgcatacgatggcaagaagtcttaccttcttgctaaattcttgacgcgtatgcgcatcacgccaaaccatatcaagcgcaagacaagcagtggaaagcctcgacctgccccgcccaagactatttccggtctggccaagagggaagatggtagatcatccccaaatccgcctaaggtcgctcgtgatggcgctggtcccaatgatgtgcagttcttcttgagagccccaggtcaagcggcgccgaaagcagctggggctggcaagaagggtaagaagggcccagctcccgccggcccagctcaggcagggaaatacgtttctgttgcacaatacttcttggattcatacggcatgaatattaacaacgagttccctgttatcaatgtcggcagccgagccgagcctagctatctgcccgttgaggcatgcgatgtcccagttggtcagccagtggccaacaaactgtcgccagaccagacaaagaacatgctcaactttgcagttagaggtcgtagcccagcgcagaatgccgaggccatcgcgaccaacggcgtgagcatgctaggagttaacccgccgaacggtacactggcatcatttggcgtcggcgtgaacccggatctgatcactgtcaagggccgtgtcctccctgcgccgacagtctactacaaaaacaacaagtctttcacccctgtcagaggttcctggaacatgcaagatatcaagttctgcaaatccggcgccctgaagaactggacatttatcttcttccctggaagacagtacgatcgaatgagcaacacagacgtcaacgacttgttgtcaactttcgccgatcatctcaggaaggcaggcattgccgttgaggcaccaaagcagggcgcccggattctacaaccgcagccaggaaatatccagaaggagataaagggccttctcgataaacacggcaaactggatctgatccttggtatcatgtccaacacagacaccgccatttacaacagtataaaacagacctgcgatgtaacctacggcgtcaagaacgtcaacgttcaagcaagcaagctcacatcggaccgaggtctcgaccaatactgcgccaacgtgggcctgaaaatcaacctaaaactcggcggcgccaaccaaagcctcaagaacatgggcctattcggcgatggcaagaccatcgtcgccggcatcgtcgcctcggtcgacaaagacctcgcccaatggcccgcggacatcgtcgtgcaaaaacgccgcgacgaaatggtctcagacctcgaccgactactccagtctcgaatccgcctctgggcctcccacaacgagggcgcattcccagaaaacattgtggtctaccgtgacggtgtcagcgaaggccaatacaacctcgtcatcgacaaggaacttcccctcctcaaacaggcctgcaaaaccgtctactcggcaaaggacaccgcaaatggtctcccaaagatggcaatcataatcgtcggcaagcgacacaacacccgcttctacccaaccaacccaggcgacgccgagaggtcgaacaacccgcagccgggaaccgtcgtcgacagaggaatctccgaaggccgctcctgggattggtaccagcaagctcactcttgcttgcagggaaccgcccgtccggcacactacttcacagtctgggacgagattttccaccccaaataccccagtgatgcgaacgggcccggcgcggcggatgtgctgcaggagttgacgcataaaatgtgttatctctttggtcgggcgacgaaggcagtttctgtctgtccaccggcgtattatgctgaccttgtctgtacgcgggcgagatgttacttgcatcatgtttttgatccgtcgactccttctgctagtgttgcaggcacggagaggagtgggaataatgacccgactctttctgattcgaagacttaccgcccgcatgaacttgttaaggataccatgttctatatctag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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