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2026-09-27 23:15:13, GGRNA.v2 : RefSeq release 233 (Jan, 2026)

LOCUS       XM_037615425            1840 bp    mRNA    linear   PLN 13-NOV-2020
DEFINITION  PREDICTED: Triticum dicoccoides protein argonaute 1A-like
            (LOC119345289), mRNA.
ACCESSION   XM_037615425
VERSION     XM_037615425.1
DBLINK      BioProject: PRJNA531190
KEYWORDS    RefSeq.
SOURCE      Triticum dicoccoides
  ORGANISM  Triticum dicoccoides
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_021242455.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Triticum dicoccoides Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1840
                     /organism="Triticum dicoccoides"
                     /mol_type="mRNA"
                     /isolate="Atlit2015"
                     /db_xref="taxon:85692"
                     /chromosome="Unknown"
                     /tissue_type="leaf"
                     /dev_stage="vegetative"
                     /ecotype="Zavitan"
                     /geo_loc_name="Israel: Aaron Aaronsohn experimental farm
                     Atlit"
     gene            1..1840
                     /gene="LOC119345289"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 22 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:119345289"
     CDS             49..507
                     /gene="LOC119345289"
                     /codon_start=1
                     /product="protein argonaute 1A-like"
                     /protein_id="XP_037471322.1"
                     /db_xref="GeneID:119345289"
                     /translation="
MAVAVGTTKQAVMAAVAVGTAKEAARACTLPTSCGSTPRNLRRDLIRGTNGLHYLKIKKALRGPRVVVTHQVEVRRKYRIAGLTNQSSRDSRFELSTGETKPVRDFFRGTYKLQLRYVFSPACKLVQSRNPTIFQWRSAIYSFRTAVPKEAR"
     misc_feature    163..>399
                     /gene="LOC119345289"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
ORIGIN      
gtgaccgtgccggtgacggcgaccgcggccgtggttactacaagggagatggcggtggccgtgggtactaccaagcaggcggtgatggcggctgtggccgtgggtactgccaaagaggctgcaagagcctgtacactgccgacgagctgcggttcaacaccaaggaatttgaggagagatctcatacgtggcactaatggtcttcattatctgaagattaagaaggccctcaggggtccgagagttgtggtcacccaccaagtagaggtgcgcaggaaataccgcatcgctggcttgacaaatcagtctagcagagattcgaggttcgaattatcgaccggcgaaaccaagcctgtgagggacttctttcgaggaacctacaagctgcaactacgttacgttttctcccctgcctgcaagttggtacagagcagaaacccaactatcttccagtggaggtctgcaatatatagtttcaggacagcggtaccaaaagaagctcgatgatagccaggtttctaatataatggcgacagcctgccagggtccagctgggcgcgaggcctccattcgcaagtctgctctggacaaaaaatataatactgccaacgtgcaaatgagtttggtatagaagttgcaaacaacccaactcctgttcaggctagaattctgcctgctccaatggtaactaaccctacttccaatatttgcagtgctcttctttgccatcttgtactactacttctctggtcagcttgacgacggcgacgacgatggctagaacagtccacggcctgaacatgtctacttatgaaaatacatcaagaaaatattgaaattgttcttgacacaaatcacttggatccgggaggtaggtggtcatagcgctagaggccagtggtggccacgtaggttgcaagcagatgaacaaacttcagtagctgtatactgactgctgaaccaatagaatttatcacacataagtatgaactgcaccatcgcccccattagtgatcggacacctgaccaaaacacacatgtgaggtatttgatatgaatctacgttgtttgcctaacaaagtaagccggcgcctagcatatagacagaaataatagcattgttagacaggttaataaagcagcacaaagttcagagcgagaaaaacttaacatctcctagcagtttcatcatccaactaggcatggtagcagatacaagatggcatttcagttatagcaatccttgtcatgagataattgggccaacgggttgaacctaatgatgatatatggccttggtttgggattatattgtgcaacatgatcctccagcagatgaaccataggtacattgatgatctgaatttcagatgcaggaattcctctcatattcggagtgtgctaagctattcgaatttgattttcaggattacattcatcattttggatgtgctgccccaagaattagagtttatcatcccccttggtgtaatcaattctgcgctgactgtgcacttgtgcgtacttttcaatattttgttttatgtatattgcgcaagtttccatgacgtccattagaaggttctttcttaagaagaacgatagaagcactagattactggcattactgtgtgcaacaaaataagacagtttgaacaaaagtaaaaaatatatgccatctaatagtatgattcatgtatgttcaatggaacctagtcatgcatagcatgcatcgtaagctaatcagtgaggcacaaacatgtttccgttttttggatgaacaaacgaaattatgtaatttcaattttcatttgaaataccaacataaagagattttttt
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]