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2026-09-27 22:32:26, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_035852642 3768 bp mRNA linear INV 14-AUG-2020 DEFINITION PREDICTED: Folsomia candida protein argonaute-1-like (LOC110851464), transcript variant X1, mRNA. ACCESSION XM_035852642 VERSION XM_035852642.1 DBLINK BioProject: PRJNA397071 KEYWORDS RefSeq. SOURCE Folsomia candida ORGANISM Folsomia candida Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Collembola; Entomobryomorpha; Isotomoidea; Isotomidae; Proisotominae; Folsomia. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019091198.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Folsomia candida Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3768 /organism="Folsomia candida" /mol_type="mRNA" /strain="VU population" /db_xref="taxon:158441" /chromosome="Unknown" /sex="female" /tissue_type="whole body" /dev_stage="adults and juveniles" gene 1..3768 /gene="LOC110851464" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns" /db_xref="GeneID:110851464" CDS 799..1602 /gene="LOC110851464" /codon_start=1 /product="protein argonaute-1-like" /protein_id="XP_035708535.1" /db_xref="GeneID:110851464" /translation="
MHFISCNRSFFNPFPQNRHPLDSMLELLHGHYQSLCLGSENTATLNIDLATKAFYKQTPLAEFARSVLKLHKDDSLDLVCWDDRTIDVVSEALRGKLIKYGTGRCNQKGVYEKYHQFTANGLILRSAENYEFNMTDEKGITRSINIVQYMQKFKNTTIRFPKWPVVHIGNKNMTNYVPLELCMIITQPYRRKMEPKLTSAMIKGVAIEPVARFKAIDQARKGSSSKPTELIPRASKFYRDSKSPPFVRVIWIVHVESGREGVPIRKL"
misc_feature 817..966
/gene="LOC110851464"
/note="Argonaute linker 1 domain; Region: ArgoL1;
pfam08699"
/db_xref="CDD:462567"
misc_feature 973..1353
/gene="LOC110851464"
/note="PAZ domain, argonaute_like subfamily. Argonaute is
part of the RNA-induced silencing complex (RISC), and is
an endonuclease that plays a key role in the RNA
interference pathway. The PAZ domain has been named after
the proteins Piwi,Argonaut, and Zwille; Region:
PAZ_argonaute_like; cd02846"
/db_xref="CDD:239212"
misc_feature order(1147..1149,1192..1194,1234..1236,1246..1248,
1300..1302,1321..1323,1327..1329)
/gene="LOC110851464"
/note="nucleic acid-binding interface [nucleotide
binding]; other site"
/db_xref="CDD:239212"
ORIGIN
tgcctcactctcttcccatattccttcctgtgcggatcgtcctctacatttctccgacttcaaagttctgagaagttgaccaacagttttcgaacttatatttccaatccaccaagtctccaccccacacagaattctactgaacaagatggctgacagagtgaaagaactcacgaagcagatggacgacgtgaggatgtcgtcgccagtgaagaagcggccacacctcccgctcactgaggcccgaccactccgcgtgaaaggcgagcctcgactcgacgtgaaaaagatttcaatcgtggtgaatcactatcccgtcaccttcgaacgaaactttccccaaacgcttacgacgcagtaattgagaatgtggaaaatcgtatcgtccgaccagacagctgccgccgccgcgaagaagaggaaagatgctcaggtgttgaaagcggcgaaggaagggcgcgagatggctgggctccccgaccgaatgctgcccatcatctggaaggaatttgagacccagtgccaggccacgcttagagccacgactcccttcgatgggaaaaagaacgtctacacagccagacgtctacaacttccgaatggggacgccttcacggccacttttgacatggatgatccagacgacccggacaaacggaggcgatttcgagtcacgataaaactggtcgcgacagttgccaccaactcggtgatcgagtttcttggatcagggctggagaggggcaaacaggttgtccagcctcaggatgtgatccaaggcctcgacgtcccccatcaatgcacttcatcagctgcaaccgcagcttcttcaatcctttcccacagaacagacatccgctggattcaatgttggagttgctgcacggccactatcagtcgttgtgcctcggatccgaaaatactgctactctcaatattgatttggcgaccaaggcgttctataaacaaacgccacttgcagagtttgctcgcagtgttttaaagttgcacaaggatgactcgctcgaccttgtttgttgggacgaccgaacgattgatgtggtctcggaagctttgagaggcaaactcatcaaatatggaacaggacgttgcaatcagaaaggtgtctacgagaagtaccaccaattcacggcgaatgggctgatcttgcggtccgcggaaaattacgagttcaacatgacagacgaaaagggcatcacaaggtcaatcaacattgtccaatacatgcaaaaattcaagaacacgaccattcgcttccccaaatggcccgtggtgcatattgggaataagaacatgacgaactacgttccactcgagctgtgcatgatcatcacgcagccgtatcgcagaaaaatggaacccaagctcacgagcgctatgatcaaaggcgttgccatcgagccagtggctcgtttcaaggcaatcgaccaagcgagaaaaggaagttcttcgaaaccaaccgagcttatcccacgcgcatcaaagttttatcgtgactcgaaatcgcctccgtttgtccgggtcatctggatcgtccatgtcgaaagtggccgtgaaggcgtccccattcggaagttgtagacgtctggctgtgtagacgttctttttcccatcgaagggagtcgtggctctaagcgtggcctggcactgggtctcaaattccttccagatgatgggcagcattcggtcggggagcccagccatctcgcgcccttccttcgccgctttcaacacctgagcatctttcctcttcttcgcggcggcggcagctgtctggtcggacgatacgatttctacattctcaattactgcgttataaattttacgacgcagtaattgagaatgtggaaatcgttacgattcgtaatgatacagcgtttgtggaaaatttggtggcttaccgagctcaacatcttctcgagagggagggtgagaaggctgacttggtcgatctcgccgaaaagttgacaattcatcccgacttggccaaacgctattcgatgttcttcgtataaagtatggatcttaaactacacgacttcataatgataattggattgataaagtcgattttctattattcttccattgttgttaatatttttatttacttatttattttgttgaagtcattttattgactgttttggatttatttcatgtaaaaagattcttttactgtcatttagattacttttaattcatggcagtttaaattataactcattttaaagtttagaataatttagtgaagttgtcacaaaaatatgttacaactatttagacatgtgcaataaaatatggcatactaaaaattgctaaattgttataaattgcatgcatagattcctccactactggagaccactttgacattgatacataccagactaattaaattatgcaatagtgtgacgacttttaagacagtatgttttgttacgtctactgttgctgaaatgttgcagaaagctcaacagctttgtcaatcaaattctcatgcatgacattcacgttgttatcgcacaaattgtcaacggccttgcatgcctatactgcacacacacacgtaccacgccatgcgcaaagttatcattaagaataagatgagtttatgttgttgatttcttaaaacgtgatagaatcgagataaaaatgagttgcattagtaagccctattttcggtgtggaattcaatgcaatacaagttaaaaatacacatccgaagcaagaactctctcttcttccagctccagacaagtacaaaacttttaatattttgtgactactatttcctcgccctaccgaccttttcgtcgtcactgtaaataaaaatgctcatgctcaaaacagatttgtggatgcactatttagttggcaaatcactccttgccatcgtagtatttctcctgaaaaaaagtaactatattgacaacacggttgtctcctccgtttatttatcgtgtgggcgtcaattcaacaacgcttgtccatgggacgacattcgctaatctagaaatgacaacagttatataataacagcacataaactgtttactcaagttctattattgtcccccgactcccacgatgttggtaaaatggcctgaaatcgcttttacgaaattatttaaactaataattcgcccgtctttctttgcgtaagtaaacgtaaaaaaataatttcatacacgatacaaggttgccatcaaggtttttcaggtattgacaggagttcggaaattatggctggcatgcgaaggcgacggtatgcatgagacggtttcttgttatcgtatgaggtgtatgatgccgttgtttagatctgtttaagcagtggcagagataaaaaatatatgtccgccacatctcagcaacagattaccgtggccttagtcgaagtggaggcgaagatactgagtaatgtttcagaacgaggatgataagctttgcaattgtgggtgtgtgccattccttggtggtaagtgtataggtaagtgtaagtgtgaatgtaaaaaaaaacgtgctttcacccacaattccgagcacgagttgtcccatacaatgttggtacagtactattcgagctctggaacatccaaccatcatttgatgtttgatatgtgaaaataatggtaagacttggatttgatttttgagtgagacacgcgacgacgaacgtgttggcgatattattctgcatgagaaaaattaaggacacaatttgtgagagcactgatcatgaag
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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