ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2026-06-10 08:51:03, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_032843692 414 bp mRNA linear MAM 14-MAR-2020
DEFINITION PREDICTED: Lontra canadensis late cornified envelope protein
1A-like (LOC116858788), mRNA.
ACCESSION XM_032843692
VERSION XM_032843692.1
DBLINK BioProject: PRJNA611578
KEYWORDS RefSeq; includes ab initio.
SOURCE Lontra canadensis (Northern American river otter)
ORGANISM Lontra canadensis
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia;
Musteloidea; Mustelidae; Lutrinae; Lontra.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_022631136.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Lontra canadensis Annotation Release
100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.3
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 100% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..414
/organism="Lontra canadensis"
/mol_type="mRNA"
/isolate="GAN:19392208"
/db_xref="taxon:76717"
/chromosome="Unknown"
/sex="female"
/tissue_type="blood"
/dev_stage="adult"
gene 1..414
/gene="LOC116858788"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 6 Proteins"
/db_xref="GeneID:116858788"
CDS 1..414
/gene="LOC116858788"
/codon_start=1
/product="late cornified envelope protein 1A-like"
/protein_id="XP_032699583.1"
/db_xref="GeneID:116858788"
/translation="
MGPKVQNRSYEAFQVALAKENEAENQTSDSISEMSYQQNQQQCQSPPKCPTPKCPPKCPPKCPSISSCCSVSSGGCCSSSSGGRSCCSFGGGSSCLSHHRRHRSHCHRCQSSGCCSQPSGGSSCCGGGSSQSSGGCC"
ORIGIN
atggggcccaaggtccaaaacaggagctatgaggccttccaggtggcacttgccaaagagaatgaggcagaaaatcaaacttccgactccatcagcgagatgtcctaccagcagaatcagcagcagtgccagtcccctcccaagtgtcccaccccgaagtgccctccaaagtgtcccccaaagtgcccctcaatctcttcttgctgcagtgtcagctctgggggctgctgcagctccagctccgggggtagaagctgctgcagttttggaggtggcagctcctgcctgagccaccacagacgacacaggtcccactgtcacagatgccagagctctggctgctgcagccagccctcagggggctccagctgctgtggagggggcagcagtcagtcctctggaggctgttgctga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]