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Previous release (v1)
2026-06-10 11:05:11, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS NR_199405 1420 bp rRNA linear BCT 28-APR-2025
DEFINITION Afipia dichlorophenoxyacetatis strain DD3 16S ribosomal RNA,
partial sequence.
ACCESSION NR_199405
VERSION NR_199405.1
DBLINK Project: 33175
BioProject: PRJNA33175
KEYWORDS RefSeq.
SOURCE Afipia dichlorophenoxyacetatis
ORGANISM Afipia dichlorophenoxyacetatis
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
Hyphomicrobiales; Nitrobacteraceae; Afipia.
REFERENCE 1
AUTHORS Sawada,H., Sakai,Y., Takashima,Y., Naito,K., Horita,M. and Satou,M.
TITLE Afipia dichlorophenoxyacetatis sp. nov., isolated from field soil
in Japan, degrades 2,4-dichlorophenoxyacetic acid
JOURNAL Int J Syst Evol Microbiol 75 (2) (2025)
PUBMED 39928400
REMARK DOI:10.1099/ijsem.0.006672
REFERENCE 2 (bases 1 to 1420)
CONSRTM NCBI RefSeq Targeted Loci Project
TITLE Direct Submission
JOURNAL Submitted (24-APR-2025) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1420)
AUTHORS Sawada,H. and Satou,M.
TITLE Direct Submission
JOURNAL Submitted (08-JUN-2023) Contact:Hiroyuki Sawada National
Agriculture and Food Research Organization, Research Center of
Genetic Resources; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602,
Japan URL
:https://www.naro.go.jp/english/laboratory/ngrc/index.html
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence is identical to LC770309.1:1-1420.
FEATURES Location/Qualifiers
source 1..1420
/organism="Afipia dichlorophenoxyacetatis"
/mol_type="rRNA"
/strain="DD3"
/isolation_source="field soil"
/culture_collection="MAFF:311804"
/type_material="type strain of Afipia
dichlorophenoxyacetatis"
/db_xref="taxon:3116917"
/geo_loc_name="Japan:Ibaraki"
/collection_date="2005-08"
/collected_by="Yoriko Sakai"
rRNA <1..>1420
/product="16S ribosomal RNA"
ORIGIN
agcgaacgctggcggcaggcttaacacatgcaagtcgagcgggcgtagcaatacgtcagcggcagacgggtgagtaacgcgtgggaacgtaccttttggttcggaacaacacagggaaacttgtgctaataccgaataagcccttacggggaaagatttatcgccgaaagatcggcccgcgtctgattagctagttggtgaggtaacggctcaccaaggcgacgatcagtagctggtctgagaggatgatcagccacattgggactgagacacggcccaaactcctacgggaggcagcagtggggaatattggacaatgggcgcaagcctgatccagccatgccgcgtgagtgatgaaggccctagggttgtaaagctcttttgtgcgggaagataatgacggtaccgcaagaataagccccggctaacttcgtgccagcagccgcggtaatacgaagggggctagcgttgctcggaatcactgggcgtaaagggtgcgtaggcgggtctttaagtcaggggtgaaatcctggagctcaactccagaactgcctttgatactgaagatcttgagttcgggagaggtgagtggaactgcgagtgtagaggtgaaattcgtagatattcgcaagaacaccagtggcgaaggcggctcactggcccgatactgacgctgaggcacgaaagcgtggggagcaaacaggattagataccctggtagtccacgccgtaaacgatgaatgccagccgttggaaagtttacttttcagtggcgcagttaacgctttaagcattccgcctggggagtacggtcgcaagattaaaactcaaaggaattgacgggggcccgcacaagcggtggagcatgtggtttaattcgacgcaacgcgcagaaccttaccagcccttgacatcccggtcgcggtttccagagatggattccttcagttcggctggaccggtgacaggtgctgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccccgtccttagttgctaccatttagttgagcactctaaggagactgccggtgataagccgcgaggaaggtggggatgacgtcaagtcctcatggcccttacgggctgggctacacacgtgctacaatggcggtgacaatgggaagcaaaggcgcaagccctagcaaatctcaaaaagccgtctcagttcggattgggctctgcaactcgagcccatgaagttggaatcgctagtaatcgtggatcagcatgccacggtgaatacgttcccgggccttgtacacaccgcccgtcacaccatgggagttggttttacctgaagacggtgcgctaaccgaaagggggcagccggccacggtagggtcagcgactggggtgaagtcgtaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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