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Previous release (v1)
2026-06-10 11:05:10, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS NR_199402 1460 bp rRNA linear BCT 28-APR-2025
DEFINITION Acidovorax sacchari strain HC-19 16S ribosomal RNA, partial
sequence.
ACCESSION NR_199402
VERSION NR_199402.1
DBLINK Project: 33175
BioProject: PRJNA33175
KEYWORDS RefSeq.
SOURCE Acidovorax sacchari
ORGANISM Acidovorax sacchari
Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
Burkholderiales; Comamonadaceae; Acidovorax.
REFERENCE 1
AUTHORS Sawada,H., Shinohara,H., Takashima,Y., Naito,K. and Satou,M.
TITLE Acidovorax sacchari sp. nov., a pathogen causing red stripe of
sugarcane in Japan
JOURNAL Int J Syst Evol Microbiol 75 (2) (2025)
PUBMED 39907557
REMARK DOI:10.1099/ijsem.0.006575
REFERENCE 2 (bases 1 to 1460)
CONSRTM NCBI RefSeq Targeted Loci Project
TITLE Direct Submission
JOURNAL Submitted (24-APR-2025) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1460)
AUTHORS Sawada,H. and Takashima,Y.
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2024) Contact:Hiroyuki Sawada National
Agriculture and Food Research Organization, Research Center of
Genetic Resources; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602,
Japan URL
:https://www.naro.go.jp/english/laboratory/ngrc/index.html
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence is identical to LC797516.1:1-1460.
FEATURES Location/Qualifiers
source 1..1460
/organism="Acidovorax sacchari"
/mol_type="rRNA"
/strain="HC-19"
/isolation_source="leaf of sugar cane"
/host="Saccharum officinarum"
/culture_collection="MAFF:311311"
/type_material="type strain of Acidovorax sacchari"
/db_xref="taxon:3230736"
/geo_loc_name="Japan:Okinawa"
/collection_date="2001-11"
/collected_by="Hirosuke Shinohara"
rRNA <1..>1460
/product="16S ribosomal RNA"
ORIGIN
attgaacgctggcggcatgccttacacatgcaagtcgaacggtaacaggtcttcggatgctgacgagtggcgaacgggtgagtaatacatcggaacgtgcccgatcgtgggggataacgaggcgaaagctttgctaataccgcataagatctatggatgaaagcaggggaccgcaaggccttgcgcgaacggagcggccgatggcagattaggtagttggtggggtaaaggcttaccaagcctacgatctgtagctggtctgagaggacgaccagccacactgggactgagacacggcccagactcctacgggaggcagcagtggggaattttggacaatgggcgcaagcctgatccagccatgccgcgtgcaggatgaaggccttcgggttgtaaactgcttttgtacggaacgaaaagccttcttctaataaagggaggtcatgacggtaccgtaagaataagcaccggctaactacgtgccagcagccgcggtaatacgtagggtgcaagcgttaatcggaattactgggcgtaaagcgtgcgcaggcggtgatgtaagacagatgtgaaatccccgggctcaacctgggaactgcatttgtgactgcatcgctggagtacggcagagggggatggaattccgcgtgtagcagtgaaatgcgtagatatgcggaggaacaccgatggcgaaggcaatcccctgggcctgtactgacgctcatgcacgaaagcgtggggagcaaacaggattagataccctggtagtccacgccctaaacgatgtcaactggttgttgggtcttcactgactcagtaacgaagctaacgcgtgaagttgaccgcctggggagtacggccgcaaggttgaaactcaaaggaattgacggggacccgcacaagcggtggatgatgtggtttaattcgatgcaacgcgaaaaaccttacccacctttgacatgtacggaatcctttagagatagaggagtgctcgaaagagaaccgtaacacaggtgctgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccttgccattagttgctacgaaagggcactctaatgggactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcctcatggcccttataggtggggctacacacgtcatacaatggctggtacagagggttgccaacccgcgagggggagctaatcccataaagccagtcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcggatcagaatgtcgcggtgaatacgttcccgggtcttgtacacaccgcccgtcacaccatgggagcgggttctgccagaagtaggtagcctaaccgtaaggagggcgcttaccacggcagggttcgtgactggggtgaagtcgtaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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