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Previous release (v1)
2026-06-10 11:05:10, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS NR_076276 2883 bp rRNA linear BCT 03-FEB-2015
DEFINITION Porphyromonas gingivalis strain ATCC 33277 23S ribosomal RNA gene,
complete sequence.
ACCESSION NR_076276
VERSION NR_076276.1
DBLINK Project: 188943
BioProject: PRJNA188943
KEYWORDS RefSeq.
SOURCE Porphyromonas gingivalis
ORGANISM Porphyromonas gingivalis
Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
Porphyromonadaceae; Porphyromonas.
REFERENCE 1
AUTHORS Naito,M., Hirakawa,H., Yamashita,A., Ohara,N., Shoji,M.,
Yukitake,H., Nakayama,K., Toh,H., Yoshimura,F., Kuhara,S.,
Hattori,M., Hayashi,T. and Nakayama,K.
TITLE Determination of the genome sequence of Porphyromonas gingivalis
strain ATCC 33277 and genomic comparison with strain W83 revealed
extensive genome rearrangements in P. gingivalis
JOURNAL DNA Res. 15 (4), 215-225 (2008)
PUBMED 18524787
REFERENCE 2 (bases 1 to 2883)
CONSRTM NCBI RefSeq Targeted Loci Project
TITLE Direct Submission
JOURNAL Submitted (14-FEB-2013) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2883)
AUTHORS Hattori,M., Yamashita,A., Toh,H., Oshima,K. and Shiba,T.
TITLE Direct Submission
JOURNAL Submitted (10-APR-2007) Contact:Masahira Hattori University of
Tokyo, Graduate School of Frontier Sciences; 5-1-5 Kashiwanoha,
Kashiwa, Chiba 277-8562, Japan URL
:http://www.cb.k.u-tokyo.ac.jp/hattorilab/
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence is identical to AP009380:231618-234500.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..2883
/organism="Porphyromonas gingivalis"
/mol_type="rRNA"
/strain="ATCC 33277"
/culture_collection="ATCC:33277"
/type_material="type strain of Bacteroides gingivalis"
/db_xref="taxon:837"
rRNA 1..2883
/product="23S ribosomal RNA"
ORIGIN
aagggcagacggtggatgcctaggctctcggaggcgaagaaggacgtgataagctgcgaaaagctgcgggaatcggcacatacgaattgatccgcagatatccgaatggggcaacccgtcaggccaaggcctgacacatgaattgatttcatgagcgaacgcggggaactgaaacatctcattacccgtaggagaagaaaacaaaagtgattccctcagtagtggcgagcgaacggggattagcccaaaccggctttgtttcggcaaagtcggggtaataggacttcgacaaaagtttaatgatagatataggagaacctactggaaagtatggccgaagagcatgaaagctgcgtatccgacatatcgaaccatagacgacggagcacctgagtagcgcgggacacgagacatcctgtgtgaattggcggggcccatcccgtaaggctaaatactcccgagagaccgatagtgaaccagtaccgtgagggaaaggtgaaaagaacctcgaacagaggagtgcaatagaccctgaacccgtctgcctacaagcggtaggagcgccattaaggtgtgactgcgtgccttttgcataatgaacctacgagttactgtttgtggcaaggttaattgttataatcaagacaaggagccgaagcgaaagcgagtcttaaaagggcgcccatttagtcacgagcagtagacgcgaaaccaagtgatctacccttggtcaggttgaaggttaggtaacactaactggaggaccgaatcggtaagcgttgaaaagctttcgaatgaactgagggtaggggtgaaaggctaatcaaacttggagatagctcgtactccccgaaatgcatttaggtgcagcctgttggatgttatcatgaggtagagcgactgattggatgcgagggtttcaccgcctatcaagtccagataaactccgaatgcatgataattgaccgatggagtgagggcatgggtgctaaggtccatgtccgagaggagaagaatccggaccaccggctaaggtcccgaaataattgctaagttgtaaaaacgaagtcaagatgcagagacagctaggatgttggcttggaagcagccattcatttaaagagtgcgtaacagctcactagtcgaggattttggcatggataatacacgggcataagcaatttaccgaagccgtgggatataatatatatcggtaggggagcattccagcgacgtagaagggaaaagggcgactttttctggagtttctggaaaagcaaatgtaggtataagtaacgataaagggggcgagaacccccctcgccgaaagaccaaggattcctgatcaacgctaatcggatcagggttagtcggggcctaaggataagccgaacggcgattccgatggaagaaccggttaatattccggtactgatacagagagcgatgtggtgacggagaagtgacagtccggccgtctgacggaataggcggttaaagggtgtagatgttgatcggggtaggcaaatccgccctgagagtcgaacctgacagtacccggagtacatgtacgaagggataaggatgtaaaccggctcccaagaaaacccgctaagcatatttctgtgttacccgtaccgtaaaccgacacaggtggttgggttgagtatactaaggcgctcgagagattcgcggttaaggaactaggcaaaatggtcctgtaacttcgggagaaaggacgcctgtctccggacaggccgcagaaaccaggcccaggcgactgtttaacaaaaacacaaggctatgcaaaaaagcaatttgaggtatatagtctgacacctgcccggtgctggaaggttaagaggaggagtcatcgtcaagagaagctctgaattgaagccccagtaaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcgggtaagttccgacctgcacgaatggtgtaacgatctgggcactgtctcaaccgcgatctcggtgaaattgtagtatcggtgaagatgccgattacccgcaacgggacgaaaagaccccgtgaacctttactatagctttacattgtatttgggcatcagatgtgtaggataggccggaggcagagaagcgggtacgccagtattcgtggagtcgatgttgaaatacggcccttttgatgtttggatactaactcgcggcgtgcgaggacactgtatggtgggtagtttgactggggtggtcgcctccaaaagcgtaacggaggcttctaaaggtaccctcaggccgattggtaaccggtcgcagagtgtaatggcacaagggtgcttgactgggagacaaacaagtcgcacaggtaggaaactagagcatagtgatccggtggttccgcatggaagggccatcgctcaaaggataaaaggtactccggggataacaggctgatcactcccaagagctcatatcgacggagtggtttggcacctcgatgtcggctcgtcacatcctggggctggagaaggtcccaagggttgggctgttcgcccattaaagtggcacgcgagctgggttcagaacgtcgtgagacagttcggtctctatctgttgtgggcgcaggaaatttgcgagggtctgacactagtacgagaggaccgtgttggacagacccctggtttaccggttgtaccgccaggtgcaccgccgggtatccacgtctggtaaggataagtgctgaaagcatctaagcacgaagccggcctcaagataagatttccataaatagggtggttaaagactatgaccttgataggctgcaggtgtatgattggtaacaattaagccgagcagtactaatagcccgaaacttttgt
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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