ver.2
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Previous release (v1)
2026-06-10 14:23:59, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_012673829 3902 bp RNA linear VRT 11-JUL-2025
DEFINITION PREDICTED: Calonectris borealis NRDE-2, necessary for RNA
interference, domain containing (NRDE2), transcript variant X3,
misc_RNA.
ACCESSION XR_012673829
VERSION XR_012673829.1
DBLINK BioProject: PRJNA1289127
KEYWORDS RefSeq.
SOURCE Calonectris borealis (Cory's shearwater)
ORGANISM Calonectris borealis
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes;
Procellariiformes; Procellariidae; Calonectris.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_134316) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_964195595.1-RS_2025_07
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.4
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 07/10/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3902
/organism="Calonectris borealis"
/mol_type="transcribed RNA"
/db_xref="taxon:1323832"
/chromosome="5"
gene 1..3902
/gene="NRDE2"
/note="NRDE-2, necessary for RNA interference, domain
containing; Derived by automated computational analysis
using gene prediction method: Gnomon. Supporting evidence
includes similarity to: 16 long SRA reads, and 100%
coverage of the annotated genomic feature by RNAseq
alignments, including 1 sample with support for all
annotated introns"
/db_xref="GeneID:142082797"
misc_RNA 1..3902
/gene="NRDE2"
/product="NRDE-2, necessary for RNA interference, domain
containing, transcript variant X3"
/db_xref="GeneID:142082797"
ORIGIN
cgctccgcccccgccatggagttgctgcgtaggcggtgctgccgctgggggccgagatcccggcagcggcggtctatgtcccacgcctctggaggtccgggagtgcggcagaggggctcgtctgtccggccagccccaccgctgagtgcgctctgtaagcgctgtttcagagggcggtgtgcccctcagcccgggctcctcccgcaggtgcggagcaccagcgtagaaccaagctacaggcacagtcaggggactaatgtttatgactccatttctcaagaattggactggcttagtaacccaagcttctctacggaagatgcactattactgcatcagcgcactacagaagttgcaaatctcatccctgaaaaatcaccactaataagcaggactacttcaagatcagagttgtcaggggaaagtgatacagatgagagtctgaaacagtcaagtaagaaaaggaaaaagaaaaagaaaaagcatcaccactataagaagacaaaaaagaaaaccaaaggggactctagtagcagcgaatcagacctggacactaagcacatcaaggacaaagccacaagaagtggcagaaatcatgaaaaggaagcagcagtgaatctagataagaaaacatcaaatcttaccagcagtcgctctgtttggcttgatgatatccaagctttcacagcagaaaccttcagaatagacaagaaaccagaccctgcaaactgggcctacaaatccctgtatcgaggggacatagcaagatataaaaggagaggagagtcatgtcttggcatagatgcaaagaaacagtgtataacttgggacagttctgcatcaaaaaggaagcaattacagaggcgacctgagcgctacttcacaaagaacaatatgaagatgctgaacatagatgggattcctgtttgcaataaaagttctccgtctgacccaactgcttttataccagttttccaaatggaaactgatgatctttctgacacagcggaggtaaatcctcttgggatttatgatccatcaactacagtgtggctacaaggaaaagggtgcaagagtgcagaccatgagcctgtaaatacgcagcaaacaattcaagagcctgggataaaaattaactccattctaatgacaaaagtggaagaacataacaagaaagtcagagaaaacccaagagatattaatgcttggatggaatttgtttcttttcaggatgaattaatgagaggacctagcccttatgccagtaagggagagcaggaagtaagaagaaaatcactgaagttaatcttagaaaagaaactggctattttagagagggcaattgaaagcaatccaagtaatgttgatctgaaacttgccaggctgaagctttgcacagagttctgggaaccaccagccttgatcaaagaatggcagaagctaattttcttacatcccaataatccagagctgtggaagaaatatctcctgttctgtcaaagtcagtttactaccttttctgtttcaaaaatcaatagtctctatggaaaatgtttgactacactggcagctgtacaggatggcagtatggtgtcacatcctctactgcctggcacagaagaagctatgttagctatatttattcagcagtgccactttctgaggcaggctggccattctgagaaagcagtgtctttgtttcaggctctgattgacttcaccttctttaaacctgacagtgtaaaagatctgccgacaaggggacaggtggaattctttgaacccttttgggatagtggagaaccacgtattggagaaaaaggagcaagaggctggaaagcatggatgcaccaacaagaaaagggtggctggattgctcttaagcctgatgatgatgatgatgaagagatagatgaggatcaagaaataaaggataaaactctccccaagtggcatatttggttggatattgaatattctcgtgaagcaaggcattggttaccttggaggccagacaaaaccaaaaaggaaactgaagaagattgtgaagatccagaaagacaggtattatttgatgatctcggaccatctttaatccagctttctaatccagatcttcaatgtcaactactgtactcgtttttgcaattcctgggagttccatgtacaagtaaactctttccttccaacctctatattgccatggatgaaaataacatctttgacagtgtgctttctgatgaaaagccactgacttctgttgattttccactttctggattcaacagtattggtcatatggacacaatgctacgagggagacatcacataggccactataaagaaggagaggagttcatacagaatgtttttcatgttctattcctgctattttcaggaaaggaaaaatctaacctgtccgtttgttggttacagtatgaagtatctaaggtagttcagtgtctccaagcaaaaaacaagaagaagctgaaagcacaagggaggaagagtaaaaagttggccaagaatctccttaaagcacctgacaaccgaaaccatctttctctctggaaactatatgcctacctagaatggctgcttggtaacattgatgatgccaggaaggtatttgacacagctctttgcatggcagggacaggaggattgaagagtccccagctctgcagcctcactctgctttatgctcagctggaagtggaactactagaaagtacagacggagctgttacgtcacgtgctgttcatatattgaccaaattggctgaaagtggaccgtatgtgccgtatagtggacaagtgttatctgtgaatgtcttaaaagctcgcaaaacatatgagcatgcactgcaagattatttaagtaaaacaccagtttctgatcaggatcaggtcagtgatgctaatcagctggttaacttggttggttgttacgcactgttccagtatttgactgttgggattgatgctgcagtattaatatatgcacagacttcggaaaaacttgaagctcctggtccacagacaggtgaaaatactggagagaattttggcattcaaaattttcccactgctcttgaagctgtcacagtgctgcatacaaatttactcagattccacatgaaaattagtgtttatcctttgagtcctctgcgagaggcactaactgaggctctgaaacggtatcctagcaaccagtctctttggaggtcatatatccacatccaaaggaagtctcacagtgctagcaaagcacgaagattttttgatggtgtcacaaggtctactaactctttagagccatggctgtttgcaatccaagcagagcagatgagaaaaaaactcactgagaatgtccagagggcaggtgttggtgaaatacattctactattcctgaaactgggttaacaaatcggattgtagctctatttgaacacgcagttcagagtgaaaatggtacccattgtccactgctgtggaggatgtatttgaactttctgaatcacacaatggctgaggttggaagggacctctggagatcatcttgtccaactccactgttcaagcagggccacctagagccagttgtccatgacaatgtctagatagcttttgaatatctccaaggatggagactccataactctctgggcaacccatgctagtgctcagtaaccctgacagaagaagagtgtttcctgatgttcagatggaacctcatgtgcttcagttgctgtctgttgcctctggtcctgtcactgggcaccactgaaaggagcctggctccctcttctttacatcctcgcttcaggcttcactaggaaaaaaagaaaaaagtaaaggattgttttataaagcccttcaaaactgtccttgggcaaag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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