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Previous release (v1)
2026-06-10 14:23:55, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_005791131 9088 bp RNA linear MAM 01-AUG-2025
DEFINITION PREDICTED: Herpailurus yagouaroundi NRDE-2, necessary for RNA
interference, domain containing (NRDE2), transcript variant X2,
misc_RNA.
ACCESSION XR_005791131
VERSION XR_005791131.1
DBLINK BioProject: PRJNA717316
KEYWORDS RefSeq.
SOURCE Herpailurus yagouaroundi (jaguarundi)
ORGANISM Herpailurus yagouaroundi
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae;
Felinae; Herpailurus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024412396.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Updated annotation
Annotation Name :: GCF_014898765.1-RS_2025_07
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.4
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 07/31/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..9088
/organism="Herpailurus yagouaroundi"
/mol_type="transcribed RNA"
/isolation_source="originally collected by Mitchell Bush
(The Center for Species Survival, Department of
Reproductive Sciences, Smithsonian Conservation Biology
Institute, Smithsonian's National Zoological Park, 1500
Remount Road, Front Royal, VA 22630, USA) from Blijdorp
Zoo, Rotterdam, Netherlands (Director Dirk Van Dam) from a
breeding male juguarundi from Mexico"
/db_xref="taxon:1608482"
/chromosome="Unknown"
/sex="male"
/cell_line="HYA-1"
/tissue_type="fibroblast cell line, passage 10"
/ecotype="Mexico"
/collection_date="Dec-1981"
gene 1..9088
/gene="NRDE2"
/note="NRDE-2, necessary for RNA interference, domain
containing; Derived by automated computational analysis
using gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 39 samples with support for all annotated
introns"
/db_xref="GeneID:121032179"
misc_RNA 1..9088
/gene="NRDE2"
/product="NRDE-2, necessary for RNA interference, domain
containing, transcript variant X2"
/db_xref="GeneID:121032179"
ORIGIN
gtcaagccccagggagtgcgagtgggaaaaccacacttcccagagtgcaccgcaaccgcgaaggcctcactaccggcgtccgctcgccggcgccatttctggagagggggacggcggtgcggcctgccgtcatggcgctgttcccggcctttgcaggcattggtgagacttccggtagcggcagcgccaggaaagaattagactggctgagcaacccaagcttttgtgctggagccataacctctctgagccaacaaactgaaggggccacagccctggtttctgaagggtcacctctgacaaggagccctctgaaatcagagccttcagatgacagtgacactaacaaaaagcccaaacaaacaagcagaaaaaagaagaaagagaaaaagaagaaaaggaagcatcaccacaagaaaaccaggagaaaacatgggcggtccagtagcagtgggtctgagccagatagtgattctgaaaaggataaagcttccagaagctttagagacagtaaaaaggaatccgagaaaccaaaccgagaagggaacgccgtcgctgatactgggcaccgctgcgtctggctcgaggacgttcaggctctcacaggggaaaccttcagaacagataagaaaccggatcctgcaaactgggagtataagtctctctaccgaggagatatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgcatatcctgggagggggctgccacagaaaagaagcactcacgcaagcatgtcgagcgctatttcacgaagaagagcgtgggactgatgaacgttgacggagtcgccgttggcggtaaaaccgaacctccctcatctgagccggtctcatttatcccagtgaagggctcggatgatgtggttcctcctgttacgacctggctgaaccctctggggatttacgatcagtccaccacacagtggttacaaggacagggtccttcagagcaagaatcaaagcggccagactcacagacagacagagagcatgccctgctcaaggccaaggtggaggagtttaacaggagagttcgggagaatccccgggatattcagctgtggatggcatttgttgcttttcaggacgaggtcataaagagccctggcctgtatgccatcgaggaaggagagcaggaaaagcggaagcggtctctgaggctcgttctggagaagaagctggccatcctggagcgggccatcgaaagcaaccagagcagcgtggacctgaaactcgccaagctgaagctctgctccgagttctgggagccctctgccctggccaaagagtggcagaaactgatctttctgcatcccaacgatacagccctgtggcagaaataccttttattttgccagagccagtttagcacctttacggtgtcaaaaattcacggtctgtacggcaagtgcttgagcaccttgtctgccgtgaaggacggcagcatcttatcgcaccccgccctgccaggcaccgaggacgccatgtttggtctctttcttcagcaatgccacttcctgcggcaggctggtcactctgagaaggcggtctctctgttccaggccatggtcgacttcaccttcttcaaacccgacagtgtgaaagacctgcccaccaaaggacaggtggaattctttgagcccttctgggacagtggggagccccgggttggcgagaagggcgcccgaggctggagagcgtggatgcaccagcaggagcggggcggctgggtggtcatcagtccagatgatgatgatgatgagccagaagatgaggaccaggaaataagagagaagagtctgcccaggtggcagatctggcttgccaccgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagaccaagaagcaaaccgaggaagactgtgaggatccagagagacaggtgctgtttgatgacattgcccagtctatgatccgtctttccagccaggatcttcagtttcagctggttgcggcctttctgcagttcctgggcgtgccttctggcctcagccctccagcctcctgcctctacctggccatggatgagaacagcatcttcgatgacgggcttcatgacgaaatgccactgacttttctcaacctttcctcttccggtgtcagctgtgttggctgctcagacccactgggccgccggcgctggacccggggtcacaatcgagagggcgaggagttcatccgcaacatctttcaccttgtgatgcctttgttttcaggccgggagaggtctcagctctgcttctcttggttacggtacgagatcgagaaggtcatttggtgtctgcacactaaaaacaagaagaggctaaagtcacagggaaagaactgcaagaaactagccaaaaacctcctgaaggagccagaaaaccgcaacagtttttgcctctggaagcagtacgcacatctggagtggctgcttggcaacaccgaggacgccaggaaggtgttcgatgcggcgctcagcatggcggggggcagagacctgagggaccgtgagctgtgtgagctcggcctcctctacgccgggctggaggcggagctgttgccggacccgagaggggccgccacggcacgagccgttcacgtactgaccaggctgacggagcaggggccctgcgggccctactctgggcaggcgctggccgttcacatcttgaaagctcggaaggcgtacgaacacgcgctgcaggactgtttgggcgacagctgtgtgtccgctccggctcccagcgactccttcgaccgcctgactagcctggtaaaatgcttcatgctctttcagtacttgaccgtagggatcgacgcggccgtgcgggtgtacgagcaggtgttcgcaaaactgaagggctctgttccccccgggggctccggcccggaggacggtgcccgcgcccagggcccccacggcgcgctggaggccgtgacgctgatgcacacgagcctgctcaggttccacacgaaagtcagcctttaccccctggctcctctgcgacaggctctctccgaggcgttaaggttgtacccaggcaaccaggtgctttggcgggcatacgtgcagattcagagcaggtcccacacagccagtgagaccagaagatttttcgacgcggtcaccaggtctaccaaactcttggagccttggttgtttgcgatcgaggccgagaaaatgaggaagagactggtggaaagtgttcagagggtagatggtagagaggtccacgccacaattcccgagaccggcttgacacatcgcatcagagccctgtttgaaaatgcgttgcggagcgacaatggcagccagtgccccttactgtggaggatgtacctgaattttttggtttccttaggaaacaaagaaaggagcaaaggcgtgttctacaaagcacttcagaattgtccctgggcgaaggtgctgtacctggacgccgtggagcacttccccgaagagatgcaagaggtcctggacctgatgacggagaaggagctccgggtgcgcctgcccgtcgaggagctggcgcttctgctggaggactagaccaggagagaacgggccctgccttccgggcctctcacctgccctgcccccgacccccccaccggagccgggatgcgcaggacggggacgcatgtgtgtgagcatgtgtcacgagacctccgcttttcaggtttaattcttagtaatttgggtctgggttatcagtcttttacctcttgcacattgtttggatgtgtgaaggacacaaaaccattgtttacatattgtatatgtgaatgtgtgtacgtagggaacaatcctgccaagtgaaaactaaacccgtggctcgtgtgcgggaggtctgttccactcctctgcccggccgtgaacgttccccactggcacccttggtggccctgccgtcgtggtaggaaaggtctggtttctgagcactcggacctctccccgcagctggtgaggagagcagcttttgcccttaagagccgtttaaaacttggtgttctggcctctctcccgttttaagtttctcattatttgctaggctcttgatgccacctcccttctgtggaccaggagcatcacctgggggcttgttagagatgcagcctccgggcccacctcagcccttctgagtcagggcctgcacttgaacaggaccccctggggacttaggtgcaccaagtgtggggggcactgcccaaaggacccctgcggcaggggagtgtgcaggcggccatctgagaagtgcagagtggagccagcgcctttccaccaaacccacccctgcctgggggctgtgacacaggggcccagacccagacctgccaggccacattcttgttttgatttctgagggtatgaatggaacgaaacgtaaatatccacattcagaccactttcttctgaaaaggacacgccttgtagtcattaaggacactgaactgggaggaaattgctctaccttccctgaggtcctgctctaagagaaacgcggactgctgctgactctatcctgagctctagaatggctgaagttgtatttctttggcatctcatccagagaagcccgtgtcgtggaagagaatcttgcctagaaaccagcggacactggttggggagaagggcggcgggtcagggcacccgaggaaggtggctggccagccaagtggacgcttgcctcgatctgccccgcttccttcgcggcttcaagactgaactgttcaagagaggggagaagtgccggaaatggatgaagaaagggagccacgttcccgggccacagatgccgttacacctggaaacttcgcggcaacagagcacacgtacagttcacctacctacactgaggagagagcatgcgttctggctaaatggaaatctccccatttactgcatttattgtctcgcaacacttgccaaaagtaaaacaacccacgcaacatgatgtgataaaaccacaatctcagcactaagtttctatctggttgtgaccctcaggatatttcaaatggttcagcaaaaaaagaaagtgaacagaatgataaagcaaagaggtaaaacggtaacacttggtgaactgaggtgatgggtatgtgggcatttactattgttgcaacttttctgaagacttcaaatttcctaaaatacaaagttggtgcaaaatttaaaaacgctctttaaattgaagttaccgacaaagacactaacctagttctacagatgccaacgatacacagttcagtgcaggcaccggcgtgaaaaggccccacatgcgccgtccctacctgaccttggcacttacccctacctgacagaaacccaggtcctcacatacaaagcaggctggacgcacactcagtgctgccgagcctcgccctaattctggtcatctgggaagaaatgtcctcacgcacacacacaaccaagaggtacagtccagcccaggttctcaccttgatgtcggccccagagaggtcatctttagccatgatcaagtcgtccagggtcacatcatcggccagcgtcatcctgcttgtgtggatctgaaagatgcgcctcttggtcttttcatcgggcagggggaactcaattttcctgtcaatgcggcctgcgggtataaaaggtttccagtcacacccctgtggctccccccaggctccgctgtggctcgggaagcctgtctcctcagacctgcagtttcagggggaaacttcccttgtgggaagggtccaaatcttgaaaagtgaacactgctctctgtaaatatccacatttgaattcatcccgtttaaaagaaatcctctctcctctggtgccttcagaaacacacaaactagctactgctgcttttggtgctacccgaatgcgaaattaactggagctaccataggagctatttcttcagaaaaaagaatattcattacgggaaagagaaacggtcacaacttaagactgcgatgaaaagggccacgctacacctactacatgatgctcttagccattacctcagtggaacacagcttttgggaagttattctacccttcaataacgtatttgccttgatgtgtatcacttttaaatcccctgaaagtgcacttaaacacgaacacatataaacacactcattctccgtgatgggacaaaagcaaatctgacctggtctgataagtgctggatccaaagtttctattcggtttgtggccataataactttcacgtcaccccttgaatcaaatccatccaactggttcaacagttccaacattgttcgctggatttctctttcaccaccggaatttgaatcgtatctttgaaaaaaaagagaagggatgaaaaccgaactgatctgctgaaggggaattataaaaacacctctgatgcctcaattctagcaacaaaatcagcacagcctcccaaccaccacataatcttacttaaactgtagatgttttgtgcctgagatggcatcattaattcagattgcatgtttggtatctgagcccccgacccaaccatgagctcctggaaagccttgtgacaatggctgtgtccccagagtgcagatgatgcctggctcagagtggaaactcaaggcatggctgcacactaatctccagatggtcacgactcccgggtggttgtcacctggcaccccggagcagagcctaaagcgtccacagccgcgtacagaaggagccgaggcaaacccatgtgcaggccatgcaggcagtgctccgtgatcattctcagacaagagctacaaggtctttacctctaaatgacacaaagagaaaaatgtacctttttgttccgatggcatcaatttcatcaataaacacgatggatggcgcgtgttcttctgcaactcgaaataactcccgaacgagtttgggcccatcacctaggtacttctgaataagttcagagccaaccactcttaggaaagtggctgaggtttggtttgctactgctttggctaataaggttttacctattttaggttagaaaaagaaagacaaagtgaaaaaaccctcaagtgctgtcttaacttgaaaaccctgtcactaccacctaaaacgggcagatccctctgatgaaaaggcatgccgccattccagtgtcttgacattatgttctccaaggcagataagaggaaattcagaacgttctgattatttttaaccatcttcctaaagtcatcatcatagtgtcagaaaatacactttattgggttattcgaacttgcatagaagttgcaagttattaacccgatgcatgccaccagggtttgagatccaaactctactctgaaacaatcagtgatggaaaaacggcctgagaaccctaggtctgacctaaggaaacactctttagcaccaggcctgcagcccccggggccacccgaggagtcgtggctgtgctggctgggcttccccgaggctcagctgagacagggccagctcccagtgaaacccacaaatgatagttcagacttttctcagtctctgttgtgtccttgtgaggaacttcctctcaccaatctcagggaagatctcaaacatttccagtcctgccccgttccttgagatttctatttcaggtcaaaaccaagagatctggcagccattttgtgaactttagggctggaagaccttggcccctttgatggtgagtgaggacaggggcacagggccaagcaggagcatcaggacacggtgacagttagagcagggctggtaaaggaccaaccttaggcccgcgggggaaggggaggaggctgccggggagtaacacggaagacttagttcaagtgggaagaaggacgaggcgctaagctttactacaagatgtggccacgacatccttgtggtgagacagacagagggctgggtatgaaggcttaaagtgtggagactccccgagagaatcgactagggctggtgaacagaagacaaaaaggacctttctaagtgggtggcatctttcagtccagaaacggccaaggccagctgctgtggcactgcagtagccagagggctcacagaactggcttcttcctcctcctgtcaggcccaccaccctgtgcttcaccccagctcctcagatcggtccccagcagtgcacatgcaccaaaggaggcctctcttccagcctcagccctgttgccagctcactcccagagcgaccgcggccttgggctagtggtcactggcctctctgatacttgatttcctgggctgtaagaggacaggctgcagaagctccatgcctctggagctcatctccacttgtctcccagtccctccactgtgggcagtccccagtcctctcaggatcctcctgggaacgtggtttcaattcactcaaataactgtgcttcctctggaatttacacagcgatgtactaagtcctggactgtacaatttactcaggtcaactagtcgcacggtgaaccaaatatatgtgtttttatcttcatctacgtatacagtattatattcattcagtaccaatggaccagagaatgaacttaatctgaacagcacagaataggttttaaatcagcggttctccaccatggttctgatgtctggccacacactccagatgcagatcaggattttcagggtgggaccaaatactggtattttttaaagctccagggtgatcctagtgtacagccaaggttgagcatcctggtttatttcctgtcttataaagtatatttaatagactcacactaatcttgaatcataaatacttgaaagccttatgttttacagcatgtaaatgaggtatacaagaggagttctaagaaactgtaaatgcattcacactgagcaggcatttggggtgggggctgcctactggtgttcgttttttgttgcaattcctactactgtttttaacacattaagtctgttaagtctacaatttcaagtctaagataattcagtttctaagcatctactatacagataaatatacttttgtgtaata
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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