ver.2
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Previous release (v1)
2026-06-10 14:24:39, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_068636499 2267 bp mRNA linear PLN 23-SEP-2024
DEFINITION PREDICTED: Phaseolus vulgaris protein NETWORKED 4B-like
(LOC137829649), transcript variant X2, mRNA.
ACCESSION XM_068636499
VERSION XM_068636499.1
DBLINK BioProject: PRJNA240798
KEYWORDS RefSeq.
SOURCE Phaseolus vulgaris (common bean)
ORGANISM Phaseolus vulgaris
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
kb inversion clade; NPAAA clade; indigoferoid/millettioid clade;
Phaseoleae; Phaseolus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_023753) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_000499845.2-RS_2024_09
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.3
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 09/16/2024
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2267
/organism="Phaseolus vulgaris"
/mol_type="mRNA"
/cultivar="G19833"
/db_xref="taxon:3885"
/chromosome="7"
gene 1..2267
/gene="LOC137829649"
/note="protein NETWORKED 4B-like; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 22
long SRA reads, 8 Proteins"
/db_xref="GeneID:137829649"
CDS 380..2113
/gene="LOC137829649"
/codon_start=1
/product="protein NETWORKED 4B-like"
/protein_id="XP_068492600.1"
/db_xref="GeneID:137829649"
/translation="
MMKNQPSQWWWLESHNNTRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLVERYDQVTGIRQQKTGGSPFSPLKHHQPEKLMSFTDDNYDSYYESCDVEESGESEIDDPEQEEEEDTKFNNNAELEEVQFVAANDVMEIERLGEENKDHNDHNKQKYNIYEAVMLREEIEQLRKENRVQKDELNPKSIICGELLMLREEIGRLGKENRAEKDELNQKDIICGEAMMLREEIEQLGKENRVLKDEINQKSIICGEVMMLREEIEQLRKENRGQKDELNQKDIICGEAMLLREEIEQLGKENRVLKDELNQKSIICGEVMMLREEIEQLRKENREHKDELNQKDNICGEIMMLREEIEQLGKENGALKDELNQKYIICGEVMMLREEIQQLRKENRGQKDELDQIDINSEVTMSREEIEVYIKENRVKNDELKPKGNVCGEVVMLREEIERLRKDERAQKSTLCGEVMKLKQENSAQKDHLKKKDQEKIEVIRHLSLAIDMLKQENVKMRSFIAKESTNKWKNPFGFKNFMGSLSGQLFNGLTKNQPSLVAL"
misc_feature 404..625
/gene="LOC137829649"
/note="KIP1-like protein; Region: KIP1; pfam07765"
/db_xref="CDD:429647"
misc_feature 956..1726
/gene="LOC137829649"
/note="Uncharacterized coiled-coil protein, contains
DUF342 domain [Function unknown]; Region: COG1340"
/db_xref="CDD:440951"
polyA_site 2267
/gene="LOC137829649"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
tttttttttctcctgtttaattttgtctcagttttgtttatttttatatttgtatgtatgtttttgtcttttaatttctcgaatttcgaaagttttctgctgaaggaagtgacattcttcggaggagtttatgtttgtctgtatgcggtgccttgtgaaagacgaagtggcagtgttagtgtgtctcagtcggtgcatttgtccttccatcaaacttgatatgtttgtttttttttttcatttgtatattgtgttgtgtgactttattttttatgcactgtgaatcgattaattatagttactaatctttgtgtgaaaacgatttcgtttacggtgctcttggtgttcgtgataacatagataactgaggagggctaaaatgatgaagaatcaaccgtcacagtggtggtggcttgagagccacaataacacaagacgatccccttggcttcaatccactctcacagagctaaatgagaagacaaaggcaatgttaaaactaattgaagaagatgcagattcctttgcccaacgtgcagagatgtattacaagaagagaccacagcttgtgagcatggttgaagatttctataggacacatcgatcattagttgagcggtatgatcaagtcactggaattcgtcagcagaagactggaggatcccccttttctccactcaagcatcatcaaccagagaagttgatgagttttactgatgacaattatgatagctattatgagagttgtgatgtggaggagtctggggaatctgaaattgacgatcctgagcaagaagaggaagaggatacaaaattcaataacaatgcagaactggaggaagttcagtttgtggctgcaaatgatgtgatggaaattgagagacttggtgaagagaacaaggatcataacgatcacaacaagcagaaatataacatttacgaagcagtgatgttgagggaagaaatagagcaactcagaaaagagaacagagttcagaaggatgaactcaacccgaaaagcatcatttgtggtgaattgttgatgctgagggaagaaataggacgactcggaaaggagaacagagcggagaaggatgaactcaaccagaaagatatcatttgtggtgaagcaatgatgttgagggaagaaatagaacaacttggtaaagagaacagagttctgaaggatgaaataaatcagaaaagtatcatttgtggtgaagtaatgatgttgagggaagaaatagagcaactcagaaaagagaatagagggcagaaggatgaactcaaccagaaagatatcatttgtggtgaagcaatgctgttgagggaagaaatagaacaactcggtaaggagaatagagttctgaaggatgaactaaatcagaaaagtatcatttgtggtgaagtaatgatgttgagggaagaaatagagcaactcagaaaagagaatagagaacataaggatgaactcaaccagaaagataacatttgcggtgaaataatgatgttgagggaagaaatagaacaattgggaaaagagaatggagcgctgaaggatgaactcaaccagaaatatatcatttgtggagaagtaatgatgttgagggaagaaatacaacaactcagaaaagagaatagagggcagaaggatgaactcgaccagatagatatcaatagtgaagtaacgatgtcgagggaagaaattgaagtatacataaaagagaatagagtcaagaatgatgaactcaagccgaaaggtaacgtttgtggtgaagtagtgatgttgagggaagaaatagaacgactcagaaaagatgaaagagcacaaaaaagtaccctttgtggtgaagtgatgaagttaaagcaagagaatagcgcacagaaggaccatctcaagaaaaaagaccaagagaaaatagaggtaataagacacctgagtttagctatagatatgctgaagcaggagaatgtaaagatgagaagcttcattgctaaggaatctaccaacaaatggaagaatccgtttggatttaagaatttcatgggatcattatcggggcagttgtttaatggacttacaaagaatcaacctagtcttgtagctctctagataaggttcacagagtaaatagctaagttttgtagaacaatattagaagagacctatgtacatgtcatggggacttgctcgagtaacctacagatcttgtatacagtttagtatattcctaacaaatccgagtctctagtggatttcctttgca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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