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Previous release (v1)
2026-06-10 11:07:38, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_065513049 511 bp mRNA linear INV 28-MAY-2024
DEFINITION PREDICTED: Calliphora vicina uncharacterized LOC135961545
(LOC135961545), mRNA.
ACCESSION XM_065513049
VERSION XM_065513049.1
DBLINK BioProject: PRJNA1112357
KEYWORDS RefSeq; includes ab initio.
SOURCE Calliphora vicina (urban bluebottle blowfly)
ORGANISM Calliphora vicina
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Oestroidea; Calliphoridae; Calliphorinae; Calliphora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_088784) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_958450345.1-RS_2024_05
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.2
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 05/22/2024
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 6% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..511
/organism="Calliphora vicina"
/mol_type="mRNA"
/db_xref="taxon:7373"
/chromosome="5"
gene 1..511
/gene="LOC135961545"
/note="uncharacterized LOC135961545; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 4
Proteins"
/db_xref="GeneID:135961545"
CDS 1..438
/gene="LOC135961545"
/codon_start=1
/product="uncharacterized protein LOC135961545"
/protein_id="XP_065369121.1"
/db_xref="GeneID:135961545"
/translation="
MKVYISLLMLVLALFVPLNKAVLNDVHDAIGWSNVDLKNFQYFKNLPSQDPKRAAQANLFLEHFQKKKAVLDYFENLFLGNSPFTQESEIPFNPHFGRAWRPYYVRKFGWKGERLIDALGKGYPIKQLKHFGAIPKDYGSKYYPS"
misc_feature 127..>348
/gene="LOC135961545"
/note="bacteriocin fulvocin C-related protein; Region:
fulvocin_rel; NF033852"
/db_xref="CDD:468207"
polyA_site 511
/gene="LOC135961545"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
atgaaggtgtatatttctttattgatgcttgttttagcattatttgtcccacttaataaagcggtattaaacgatgttcacgatgctattggatggtcaaatgtggatttgaaaaatttccaatattttaaaaacttgccatcgcaagacccaaaaagagcagcacaagccaatctcttcttggaacattttcaaaagaaaaaagcagttttagattatttcgaaaatttatttttgggcaattcaccattcacacaagagagtgaaattccatttaatcctcactttggtcgagcgtggcgtccttattatgtacgaaagtttggttggaaaggagaacgattaatcgatgctttgggcaaagggtaccccattaaacaattgaagcattttggagctatacctaaggactacggttccaagtattatcctagctaattatttcatataccatttagtcatcacatatttataaatatttaaaataaactatttattaaacgaaacaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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