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Previous release (v1)
2026-06-10 14:24:38, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_045971522 2787 bp mRNA linear PLN 15-JAN-2022
DEFINITION PREDICTED: Trifolium pratense protein NETWORKED 4B-like
(LOC123919502), transcript variant X2, mRNA.
ACCESSION XM_045971522
VERSION XM_045971522.1
DBLINK BioProject: PRJNA796348
KEYWORDS RefSeq.
SOURCE Trifolium pratense
ORGANISM Trifolium pratense
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
kb inversion clade; NPAAA clade; Hologalegina; IRL clade;
Trifolieae; Trifolium.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_060059) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Trifolium pratense Annotation
Release 100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 9.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2787
/organism="Trifolium pratense"
/mol_type="mRNA"
/cultivar="HEN17-A07"
/db_xref="taxon:57577"
/tissue_type="leaves"
/dev_stage="Mature plant"
/geo_loc_name="USA: Madison, WI"
/linkage_group="LG1"
gene 1..2787
/gene="LOC123919502"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 13 long SRA reads, 5 Proteins, and
83% coverage of the annotated genomic feature by RNAseq
alignments, including 15 samples with support for all
annotated introns"
/db_xref="GeneID:123919502"
CDS 373..2142
/gene="LOC123919502"
/codon_start=1
/product="protein NETWORKED 4B-like"
/protein_id="XP_045827478.1"
/db_xref="GeneID:123919502"
/translation="
MTEITMKNQLSQPHWWWLDENTTVRRSTWLQSTVTELNEKTKTMLKLIEEDADSFAQRAEMFYKKRPELVSMVEDFYRRHRLLAERYDQVRPESGIRLLNPPASCKHSQSEKLTSFDDDRGYDSYSYSESCDVEESVESEIDDPEHEEEEHEEVRSVAANDVMKLRKEIEILGEKKKGHKDQIKQIQKDDMLDVMKLREEIERSEKENEAHKDELKQEISISNEVVMKLREEIEQFQQKDTIHDHQVMKLREEIQRLNKENEALKDELKQKDTVSNEVMKLREKIERLEKENEAQKNEFKQKDTVSNEVMKFREKIERLEKENEAKKDELKQKDTISNEVMKFSEKIEQLEKENEAQKDELKQKNTISDEVMKLKEQIEQLKKENEAQKDELKQKATICNEVMKLREELEETHKKENEAQKDELKEEDTTICDEVMKLRKEIERLEKENEAQNDELKEKHIICNEVLKLREELERHREENEARKDELMHKLTIYDEVMMLKEERESFREENRTQKDDLKQKDKEKIEVIRQLSSTIDLLKQENVKMRNFIAKESAKKWKTPFKFNKLIGTFSEKLLNGIPKTKPSLVAL"
misc_feature 415..636
/gene="LOC123919502"
/note="KIP1-like protein; Region: KIP1; pfam07765"
/db_xref="CDD:429647"
misc_feature <958..>1749
/gene="LOC123919502"
/note="Chromosome segregation ATPase Smc [Cell cycle
control, cell division, chromosome partitioning]; Region:
Smc; COG1196"
/db_xref="CDD:440809"
ORIGIN
aatcaattaataataattattaaaatctccatattaagcagcattatttatttaccaaaataatctcctttaggtttcccactttccctccctctcttataatttgaaaagaaaccccccacagcacagcaccctctgtctctactgaaacccaagtcaaacaaattttgaatctcagtaactgttcaactcgaggattttgctgtctatgtcaaatacacgtgtttcatcatcactggttcacacctttccaataaaacaaactaaatcaaaaccaaaaactctgtttctagtttctaccgctctctgcaatttgagtgaggcttttggtattggtgatatctaagtaagaagaaagtgaggaagaaggtgatgactgaaattactatgaagaatcaactttcacagccacactggtggtggcttgatgaaaacaccaccgttagaagatcaacatggcttcaatctacagtcactgagctgaatgagaagacaaagacaatgttaaaattaattgaagaagatgcagattccttcgcgcaacgagctgagatgttttacaagaagagaccagagcttgtgagcatggttgaagatttctataggagacaccgcttgttagctgaacggtatgatcaagtcagacctgaatccggaattcgcctgctcaaccctcctgcttcatgtaagcattctcaatcagagaagttaacgagttttgatgatgatcgtggttatgatagctatagctattctgagagttgtgatgtagaggaatctgtggaatctgaaattgatgatcctgagcacgaagaggaagaacatgaggaagttcggtctgtggctgcaaatgatgtgatgaagctgaggaaggaaattgagatacttggtgaaaagaagaagggtcataaggatcaaatcaagcaaattcaaaaagatgacatgcttgatgtaatgaagttgagggaagaaatagagcgatccgagaaagagaatgaagcacataaggatgaactcaagcaggaaatttccatttctaatgaagtagtaatgaagttgagggaagaaatagaacaattccagcagaaagataccattcacgatcatcaagtaatgaagttgagggaagagatacaacgactcaataaagagaatgaagcactgaaggatgaactcaagcagaaagacaccgtttctaatgaagtaatgaagttgagggaaaagatagagcgactcgagaaagagaatgaagcgcagaagaatgaattcaagcagaaagacaccgtttctaatgaagtaatgaagttcagggaaaagatagagcgactcgagaaagaaaatgaagcaaagaaggatgaactcaagcagaaagacaccatttctaatgaagtaatgaagttcagtgaaaagatagaacaactcgagaaagagaatgaagcacagaaggatgaactgaagcagaaaaacaccatttctgatgaagtaatgaagttgaaggaacaaatagaacaactcaagaaagagaatgaggcacaaaaggatgaactcaagcagaaagctacaatttgcaatgaagtaatgaagttgagggaagaattagaagaaacacacaagaaagagaatgaagctcagaaagatgaactcaaggaggaagataccaccatttgtgatgaagtaatgaagttgaggaaagagatagaacgactcgagaaagagaatgaagcacagaatgatgaactcaaggagaaacatatcatttgcaatgaagtgctgaagttgagagaagaattagaaagacacagggaagagaatgaagctcgaaaagatgaactcatgcataaacttaccatttatgatgaagtaatgatgttgaaggaagagagggagagttttagagaagagaataggacacagaaggatgatctgaaacagaaagacaaagagaaaatagaggtaataagacagctcagttcaacaatagatttgctgaagcaggagaatgtaaagatgagaaacttcatagctaaggaatctgccaaaaaatggaagacaccatttaagttcaacaaactcattggaacattctcagagaaattgcttaatgggattccaaagactaagcctagtctggtagctctctagatatggttcaaaaatttaaaataccatgctgttctataaaacaatattataaagatatattgatacatatgttagggccttatcagaatttccttagaatcaattcaatatgtttcttagtgtttaaatgctagtgtactttcttatagaactatatgaataattttttaccaatattccaattgttacaattttttattcatttatctatactgtattcaacccaatgtgcccatctcactttttcatgccttaaaagtttaatttccactactctatcttaatgcaaagtgcaccaaaagaagagtcattaaaagcttcttttttgccacataagagagcattcattgttcaattgattgctaaagccaatgatctttataaataaataggaagttgtccctgcattcctaaaatctatggtatattcctcactttaaggctattatataaatagatatcaaaagaatatagtaataaaaacaaagtaacatacactaaaaaacaaagagtaaagctttagacacctcatgttttctatgtcacttatctggaattcgaatagtactggtcattcttaacttacctctaatggaactctggattattagggtcatctttccgtaaaaatcatagggttaagac
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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