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Previous release (v1)
2026-06-10 11:07:39, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_021916304 543 bp mRNA linear PLN 20-JUL-2017
DEFINITION PREDICTED: Chenopodium quinoa G-type lectin S-receptor-like
serine/threonine-protein kinase RLK1 (LOC110736155), mRNA.
ACCESSION XM_021916304
VERSION XM_021916304.1
DBLINK BioProject: PRJNA394242
KEYWORDS RefSeq.
SOURCE Chenopodium quinoa (quinoa)
ORGANISM Chenopodium quinoa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae;
Atripliceae; Chenopodium.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_018743292.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Chenopodium quinoa Annotation
Release 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 7.4
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..543
/organism="Chenopodium quinoa"
/mol_type="mRNA"
/cultivar="QQ74"
/db_xref="taxon:63459"
/chromosome="Unknown"
/tissue_type="leaves"
/dev_stage="flowering"
/geo_loc_name="Saudi Arabia"
gene 1..543
/gene="LOC110736155"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 100% coverage of the annotated
genomic feature by RNAseq alignments"
/db_xref="GeneID:110736155"
CDS 1..531
/gene="LOC110736155"
/codon_start=1
/product="G-type lectin S-receptor-like
serine/threonine-protein kinase RLK1"
/protein_id="XP_021771996.1"
/db_xref="GeneID:110736155"
/translation="
MAAWPLPSTLSLLTLILLQSSPIAAQNKGNIPVGQSLSAATNNSSWHSPSGDFAFGFSKFSNSSNLFLLAIWYVKIPTTIVWYANDGNPVPQGSSVKITANEGLVLSDPNGIDLWNTSDTLSDGGEVKYGYLNDTGNFALKSSSSDNPVWQSFNHPTDTLLPSQVMEINMEVNSKL"
misc_feature 121..468
/gene="LOC110736155"
/note="Bulb-type mannose-specific lectin. The domain
contains a three-fold internal repeat (beta-prism
architecture). The consensus sequence motif QXDXNXVXY is
involved in alpha-D-mannose recognition. Lectins are
carbohydrate-binding proteins which specifically...;
Region: B_lectin; cd00028"
/db_xref="CDD:237995"
misc_feature order(121..123,130..132,214..216,241..246,343..345,
349..351,373..375,379..381,391..393,397..423,427..468)
/gene="LOC110736155"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:237995"
misc_feature order(187..189,196..198,202..204,211..213,217..219,
295..297,301..303,307..309,313..315,319..321,397..399,
403..405,409..411,415..417,421..423)
/gene="LOC110736155"
/note="mannose binding site [chemical binding]; other
site"
/db_xref="CDD:237995"
ORIGIN
atggcggcttggcctcttcctagcaccctctccttgttaacactaatactcctacaatcatcacctattgctgcccaaaataaaggcaatataccagtaggacaatccctatcagctgccaccaataattcttcatggcattccccttcgggcgatttcgcctttggcttttccaaattttcaaacagcagcaatctcttcttgcttgccatctggtatgtcaagattcccaccaccattgtttggtacgcaaatgatggtaatcctgttcctcaaggatcatcagtcaagattacagctaatgagggactagttctcagtgatcctaacggaattgacctatggaacacctctgatacgctaagtgatggaggtgaggtaaagtatggctacctgaatgatactgggaatttcgccctcaaaagtagcagcagtgacaatccagtttggcagagctttaaccatcctacagacaccttgctgccttctcaggttatggagataaatatggaggttaactctaagctataaagaactaatttc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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